Quercus lobata (valley oak): 115989096
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Entry
115989096 CDS
T07350
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115989096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qlo02000
]
115989096
Transporters [BR:
qlo02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
115989096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_28
Rad17
AAA_25
RsgA_GTPase
ABC2_membrane_3
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
115989096
NCBI-ProteinID:
XP_030968618
UniProt:
A0A7N2LNR2
LinkDB
All DBs
Position
5:complement(26472627..26479839)
Genome browser
AA seq
1448 aa
AA seq
DB search
MEGGEIFKASSSLRVNSSSLWRNNSVEVFNRSSRMEDDEEALKWAALEKLPTFDRLRKGI
LTTSKGEANEINVESLGFEERKQLLERLVKVAEEDNEKFLMKVRNRIDRVGIDLPTIEVR
FEHVNVEAEVHVGGSALPTFFNFSVNIVEGFLNSLHILPSKKKHLSILKDVSGIIKPRRM
TLLLGPPSSGKTTLLLALAGKLDPNLKLSGRVTYNGHGMNEFVPQRTAAYISQYDLHIGE
MTVRETLGFSARCQGVGSRYDMLAELSRREKEANIKPDPDIDIYMKAATTEGQEATVVTD
YTLKVLGLDVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTF
QIVNSLKQYVHILDGTAVISLLQPAPETYNLFDDIILLSDGYIVYQGPRELVLDFFESMG
FKCPDRKGVADFLQEVTSRKDQEQYWARKDEPYSYVTAQEFAEAFHSCNVGRSIGDELSV
PYEKSKSHPAALTTNKYGVNKKELLKANFSREYLLMKRNSFVYIFKITQLFIMGLIAMTI
FLRTKMPRDSVNDGSIYTRALFFTVITIMFNGMAEISMTIVKLPVFYKQRDLLFYSSWVY
ALPTWILKIPVTFLEVGVWVFMTYYVMGFDPSPGRFFKQYLLLLLVNQMASALFRAIAAM
GRNMIIANTFGSFALLLLFALGGFILTKDDIKKWWIWGYWISPLMYGQNAIVVNEFLGGN
WRNGSTTEELGISVLKSSGFPTQAKWYWIGIGALVGFLLVFNIIFTLALTYLNPLGKAQT
VKSDEPESNEQGQRTGEGIQLTLRGNSSSHHSQIGSRSRSRSSARSGAEINANTNGKRGM
VLPFDQHSITFDDIIYSVDMPQEMMSQGVIEDKLVLLKGVSGAFKPGVLTALMGVSGAGK
TTLMDVLAGRKTGGYIEGNITISGFPKNQETFARISGYCEQNDIHSPHVTVYESLLYSAW
LRLSSEVDSETRKMFIEQVMELVELNPLRNAQVGLPGVNGLSTEQRKRLTIAVELVANPS
IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE
IYVGPLGHHSCHLIKYFESIEGVKKIKDGYNPATWMLEVSSSAEEINLGVDFTNVYKNSE
LYRRNKALIQELSKPTPNKKELYFPTQYAQPFFTQCMACLWKQHWSYWRNQPYTAVRFLF
TVFIALTFGTMFWDLGTKTERQQDLANAMGSMYAAVLFLGVQNSTSVQPVVAVERTVFYR
ERAAGMYSALPYAFAQAAIELPYVFAQAVFYGVIVYAMIGFEWTVAKFFWYLFFMYFTLL
YFTFYGMMTVAVTPNHHIAGIIASTFLIIWNLFSGFIMPRPRIPVWWRWYYWACPIAWTL
YGLIASQFGDIEKLMTDGNRDPVKEYIKSSFGYKHDFLGVVAVVVAGTAVLFAFIFAVSI
KVFNFQRR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggtgaaattttcaaggctagtagtagtttaagagtgaatagttcttcccta
tggaggaacaactctgtggaagttttcaacaggtcttcacgaatggaagacgatgaagaa
gctctcaaatgggctgcccttgaaaagcttcctacgtttgatcgtctaagaaaaggtata
ttaactacctcaaaaggtgaggctaatgaaatcaatgtagaaagtcttggatttgaagaa
aggaagcaattgcttgagaggttagtgaaagtagctgaagaggacaatgagaagttcttg
atgaaggtcaggaaccggatagatagagttggaattgatcttccaacaattgaagtacga
tttgagcacgtaaatgttgaggcagaagtacatgtgggtggcagtgctttgcctacattc
tttaacttcagtgtcaatattgtagagggttttttaaattctctccatattcttccaagt
aaaaagaaacacttgtctatcctaaaagatgttagtggaatcatcaagcctagaagaatg
acattgctattgggtcctccaagttctgggaagacaacactcttgttggctttggccgga
aagcttgaccccaatctaaagttgtctgggagggtgacttacaacggccatggcatgaat
gagtttgtaccccagagaactgctgcctatatcagtcaatatgatctccatattggagaa
atgactgtaagagagaccctgggcttctctgcaaggtgccaaggggtcggatcacgatat
gatatgctagcagagttgtccagaagagaaaaagaggcaaatatcaagccagatccagat
attgatatctacatgaaggctgccacaactgaaggccaagaggcaacagtggtgacagat
tatacattaaaggttttgggtttagatgtgtgtgctgataccatggttggagatgaaatg
ataaggggtatttctggtggacaaaggaagcgtgttacaacaggggagatgttggttgga
ccagcaaaggcattgtttatggatgaaatatcaactggattggacagttcgacaactttt
caaattgtgaattcactcaagcaatatgttcacattcttgatggaacagcagtcatctct
ctactgcagcctgcaccagagacatataatctttttgatgacattattctcctctctgat
ggctacattgtgtaccagggtccccgtgagctagttcttgacttttttgaatccatgggt
tttaaatgtccagacagaaaaggcgtggctgatttcttgcaagaggtgacatcaaggaaa
gatcaggagcagtactgggcacgcaaagatgagccttacagttatgtcacagctcaggaa
tttgctgaggcattccattcatgcaatgttggcaggagtataggagatgaactttcagtt
ccatatgaaaagagtaaaagtcacccggctgctttgacaaccaacaagtatggtgttaat
aagaaggagctgttaaaagctaatttctcaagagaatacttgctgatgaaaaggaattca
tttgtttatatcttcaaaattacacaacttttcataatgggactgattgcaatgacaatt
ttcctacggacaaagatgcctcgtgattcagtaaacgatggatcaatttatacgcgtgct
ttgttcttcactgtgattacgattatgtttaatggaatggcagagatttcaatgacgatt
gtaaagcttcctgtcttttacaagcaaagggatctcctcttctattcttcttgggtatat
gctcttccaacatggatcctcaagattccagtaacatttttagaagttggagtttgggta
tttatgacctattatgtcatgggatttgatccaagtcctggaaggttctttaaacaatac
cttctgctcttacttgtaaaccaaatggcttctgcattattccgagctattgcagcaatg
ggtagaaacatgattattgccaacacttttgggtcctttgcactgctcttactttttgcc
ttaggtggctttatacttaccaaagatgatataaagaaatggtggatatggggctactgg
atatcccctttgatgtacgggcaaaatgcaatagtggtgaatgagttcctgggcggaaac
tggagaaatggtagcacaacggaagaactgggaatttcagttttgaagtctagtgggttc
cccactcaagcaaagtggtattggattggcataggagcactagttggattcttactagtt
ttcaatatcattttcactctggctcttacttatcttaacccacttggaaaggcacagact
gtaaaatcagatgaaccagaaagcaatgaacaagggcagaggacaggagaaggcatacag
ttaacactcagaggaaacagctcaagtcaccattcccaaatagggagtaggagtagaagt
agatcatctgcaaggtcaggagctgaaattaacgccaacactaatgggaaaagaggaatg
gttcttccatttgatcaacattctatcacatttgatgatattatatactctgttgacatg
ccacaggaaatgatgagccagggtgttattgaggataaattggtgcttctgaagggtgtg
agtggtgcttttaagccaggtgttctcacagctctgatgggtgttagtggtgctggtaaa
acaactctgatggatgtgctggctggtaggaaaaccggtggatatattgaagggaacatc
acaatatcaggattcccaaagaaccaagaaacatttgctcgaatttctgggtactgtgag
caaaatgacattcattctcctcatgttactgtgtatgagtccttgctttactcagcatgg
ctccgcttatcctctgaagttgattcagaaaccagaaagatgttcattgagcaagtcatg
gagcttgtggagctaaacccattgaggaatgcacaagttgggttacctggtgtgaatggt
ctctctactgagcagcgcaagaggctcactatcgcagttgagcttgtggcaaacccctcc
ataatattcatggatgagccaacttcaggtctagatgcaagagctgctgcaattgttatg
agaacagttaggaacacagtggacactggaagaacagttgtgtgcaccatccatcagcca
agcattgacatatttgaagcttttgatgagcttttcctaatgaaacgtggaggacaagag
atatacgttgggccattgggacaccactcatgccatcttataaagtattttgagagtatt
gaaggagtcaaaaaaattaaagatggttacaatccagcaacttggatgttggaagtctca
tcttcagcagaggaaataaatttgggtgttgattttactaatgtgtacaaaaactcagag
ctgtacaggaggaacaaggcattgattcaagagttgagcaagcctactcccaataaaaaa
gaactctatttcccaacccaatatgcacagccatttttcactcaatgcatggcttgcttg
tggaagcaacactggtcctattggcgcaaccaaccatacactgccgtgagatttctgttc
acagttttcatagcgttgacatttgggacaatgttttgggaccttggtaccaagaccgag
aggcaacaagatttagcaaatgcaatgggttccatgtatgctgctgttctcttccttggt
gtccaaaattctacgtcagtgcagcctgtagtggcagttgaacgaactgtcttctacaga
gaaagagctgctggaatgtattctgcattgccatatgcatttgcacaggctgcaattgag
ctcccatatgtttttgcacaagctgtgttttatggcgtcatagtttatgcaatgattggg
tttgaatggactgttgccaaattcttttggtatctatttttcatgtacttcacattgcta
tactttaccttctacggcatgatgactgtggctgtgacgccaaaccaccatattgccggg
ataatagcgtccacatttcttataatatggaatctattttcaggattcataatgccgcga
cctaggattcctgtatggtggagatggtactactgggcatgtccaatagcttggactttg
tatggattgattgcatcacaatttggagatatagagaagcttatgactgacggcaataga
gacccagtgaaagaatatattaaaagctcttttggatacaagcatgattttctaggagtg
gttgcagttgtagttgctgggactgctgtcctctttgcattcatctttgcagtttccatc
aaggtgttcaatttccaaaggcgatag
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