Quercus lobata (valley oak): 115989287
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Entry
115989287 CDS
T07350
Name
(RefSeq) two-component response regulator ARR18-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115989287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115989287
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
115989287
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Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
HBM
Motif
Other DBs
NCBI-GeneID:
115989287
NCBI-ProteinID:
XP_030968816
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All DBs
Position
5:11411879..11417811
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AA seq
345 aa
AA seq
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MEGSVFHIIIIEQCLLGVNEFELLRIGREIDLPVIVTSEDDKPDIVQRSLKYGACDYLLK
PIPMSVLKMVWKYMFLKKDNKWAQVWQLTNNVSRVRNQRMSWTSDSHEKFVESVQKLGGI
DNATPKKILQLLQSNFKGFEDVDREKISSHLQKYRDSLKKKAQLHMLGYRDKDGTSSEHI
QSGYQMEEHSPMTLVDQVLKTTVANEPDILSQQQQAPAAKNTQGFQSVTRPFETNLQTIG
GSTSCGNQSNALMTQMDETPSSEQKWNEFTGGQPFVYESFLNDPDEFSSLDTFQGGISGD
PSFFSINAPVLSPSHIDHGEYGFSSDGIFENFTGDVIAREHFNNL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagtgtatttcatattattataattgaacaatgcttgctaggtgtgaatgaa
tttgagcttcttcgaattggtagagagatagatttgcctgttattgtgacatccgaagat
gataaacctgacattgttcaaaggagtttgaaatatggcgcctgtgattatctgctgaag
cctatcccgatgagtgttcttaagatggtgtggaaatatatgtttctcaagaaagacaat
aagtgggcccaagtgtggcagctgacaaataatgtgtccagagtgagaaatcagcgaatg
tcttggacatcagactctcatgaaaagtttgtagaaagtgtgcaaaaactggggggcatt
gataatgcaactcccaagaaaattttgcaactcttgcaaagtaactttaagggtttcgaa
gatgttgatagggaaaagatttccagccatcttcagaaataccgtgatagccttaaaaaa
aaggctcagctgcatatgctggggtacagagacaaagatggtaccagttcagagcatatt
cagtccggatatcaaatggaggaacattcaccaatgactttggtcgatcaagtcttgaag
accacggttgcaaatgagccagatatattatcacaacagcaacaagctccagcagcaaag
aacactcaaggctttcagagtgtaaccaggccttttgaaaccaacttacaaaccattgga
ggtagtactagttgtggaaaccaaagcaacgctttgatgacccagatggatgaaacacct
tcaagtgaacagaaatggaatgagttcacgggaggtcagccttttgtctacgaaagcttt
ctcaatgacccggatgagttttccagccttgatacttttcagggaggtatttctggagat
cctagtttcttctccattaatgctcctgttctgagtccttctcatattgatcatggagaa
tatggtttctcctcagatggaatatttgaaaattttactggggatgttattgctcgtgaa
cattttaacaacctctga
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