Quercus lobata (valley oak): 115989417
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Entry
115989417 CDS
T07350
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115989417
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115989417
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
115989417
NCBI-ProteinID:
XP_030968954
UniProt:
A0A7N2LRA4
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Position
5:complement(55837135..55846439)
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AA seq
622 aa
AA seq
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MGETGKRYRGQRDYDGDKNQKRRMNDKDERGNDEVVVYRILCPDGVIGSVIGKSGKVINS
IRQETRAKVKVVDPYPGAKDRVITIYCYIKEKAEVEIDDEFSNREPLCAAQDALLRVHAA
IANAVASIGDSDKKRKDREECQILVPSSQSANIIGKAGATIKKLRGKTRTNIKVTAKDAT
DPTHSCALDFDNFLMIAGEPEAVKKALFAVSAIMYKFTPREEIPLETTVQEAPPSLIIPS
DVPIYPSGGLFPSADAITARSVPPIIAASNVQDLPVYAETGNTWPLYSSTLPMMSGFSSA
SRSEELIVRVLCPFDKIGRVIGKGGGTIKSIRQASGARIEVDDTKEDRDECIITITATES
PDDLKSMAVEAVLLLQGKISDEEDDTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADV
RISKGDKPKCADGNDELVEVLGEVGSVRDALIQIVLRLRDDVLRDRDAGHNPSVGADSLF
SAGTGLSVPSVLPSVPPVGSLGYDQRVESGSGLGILSSSGLYGYGSLSMGENGYGSLPTY
SSKLYGGLPPPSTLEILVPANAVGKVMGKGGANIANLRKISGAMIEISDSKSSRGDRIAL
ISGTPEQKRAAENLIQAFIMAT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagactgggaagcgataccgtgggcagagggactatgatggggacaagaatcag
aagagacggatgaatgacaaagatgaaagggggaatgatgaagtggttgtttatagaata
ctttgcccagatggggtcattggtagtgttattggcaagagtgggaaagtcataaattct
attaggcaagagacgagggcaaaagttaaggttgtggatccatatccaggtgctaaggac
cgtgtcataacaatctactgctatattaaggaaaaggcggaggttgaaattgatgatgag
ttcagtaacagggaacctttatgtgctgctcaggatgctcttctcagagttcatgctgcc
attgcaaatgctgtggcttccattggagattctgacaagaagcggaaggatagggaggaa
tgtcaaattcttgttccatctagccaatctgcaaatatcattggtaaggctggggcaaca
ataaaaaaactgagaggtaagacgaggacaaatattaaggtcacggccaaggatgccact
gacccgactcactcctgtgctttggacttcgacaattttctaatgattgctggtgaacca
gaggcagtgaagaaagcgctgtttgcagtttctgcaattatgtacaagttcactcctaga
gaagagattcctcttgagacgactgtacaagaagctcctccaagtcttatcattccatca
gatgtccctatttatccatcaggtggattgtttccaagtgcagatgctatcaccgctaga
tctgttcctccaatcatagctgcatcaaatgtacaggatctccctgtttatgctgaaaca
gggaatacatggcccctttattcatctactcttcctatgatgtctgggttcagcagtgcc
tcacgatctgaggagttaattgtaagagtattgtgtccctttgacaagatcgggcgtgtc
attggcaagggaggtggtacaattaaaagtataaggcaggctagtggtgctcgtattgag
gttgatgataccaaggaggatcgtgatgagtgtatcatcacaattacggcaacagagtct
cccgatgatctgaaatccatggcagttgaagctgttctgttgcttcaagggaagattagt
gatgaagaagatgacactgtttcaattagactccttgttccatctaaggttattgggtgt
atcattggaaaaagtggctctattataaatgagatccgtaagagaaccaaagctgatgtc
cgaatctcgaaaggtgataagcctaagtgtgctgatggaaacgatgaacttgtggaggtg
cttggagaagttggtagtgttagagatgcacttatccagattgttttaaggcttcgtgat
gatgttttgagagatagagatgctggccataaccctagtgtcggtgctgattccttgttc
tcagctggcactggtctttcagttccatctgtcctgccttctgttccccctgttggttct
ttgggttatgatcagagggtcgaaagtggaagtggactgggaattctttcttcaagtggc
ctctatggatatggatctttgtcgatgggtgaaaatggctatggatccttgcccacatat
tcatccaagctgtatggagggttgcctcccccttcaacacttgagattttggtccctgcc
aatgcagtgggtaaagtgatgggtaagggaggggccaatatagcaaaccttcggaagata
tcaggtgcaatgatagagatttctgattccaaatcttcccgtggtgatcgtattgctctt
atatcaggcacacctgaacagaagcgtgcagctgaaaacttgattcaggcatttataatg
gccacctga
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