Quercus lobata (valley oak): 115989486
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Entry
115989486 CDS
T07350
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115989486
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115989486
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115989486
Membrane trafficking [BR:
qlo04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
115989486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
115989486
NCBI-ProteinID:
XP_030969034
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Position
5:65359029..65384385
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AA seq
999 aa
AA seq
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MESQPSRQSGRYTFEEAISRESPTALTKSNSDAAAAASSQSLSSILNNPHVAKSDWWWYS
SSSSSLAPPEFAPLISKASSELTRSDFSTYFSSISDTYNRFEDIRNHSTKDLESSASDSQ
GHGGEALVACLREVPALYFKEDFALEDGATFRAACPFSTAAENLVLQEKLTQYLDVVELH
LVKEISLRSNSFFEAQRQLQDLNVEIVEGCSRIRELKETIRLLDVDLVDSARQVQHLNAT
RTNLLALHHKFNLILYVKQSLSALKLLVASGDCAGALDITDDLQNLVDGDELTGLHCFRH
LRDNVAASIESINSILSAEFMRAAIQDSGNSDVVILSQVKARASIPTNGKDDDQVNLDEE
ETTNFRDCLLPIIIGLLRTAQLPSVLRIYRDTLTADMKNAIKNAVAELLPVLLARSESEF
SPGERTVDADGGGASLASKLRSLSSESFVQLLSAIFKIVRAHVVRAAEVKKAIEWIMKNL
DGHYAAESVATAIALGAAAAETTEDHDDQGGSLLPFSSQRAARFSSFQGKANDAISPSNM
SINFSTDVLRENTEAVVAACDAAHGRWAKLLGVRALLHPRLRLQEFLCIYNITQEFITAT
EKIGGRRGFSIRGTLNSQAKAFLDFQHDSRMAKIRAVLDQETWVEVDVPDEFQAIVISLC
SSEALISENLDHVQNNVETNHGEVIAFNDGSLVEDTAQGKPTPLAEAADKNKASLAHSND
SKMKEHGKSTSQTLSYKGVGYHMVNCGLILLKMLSEYIDMGNFLPLRSSEVVQRVVEILK
FFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIYAIIPDIRRILFLKVPETQKE
LLLSEIDRVAQDFKVHRDEIHTKLVQIMRERLLVHVRGLPQIVEGWNRPEDADAQPSQFA
RSLTKEIGFLQRVLSRILHDVDVQEIFRQVVIIVHSQVSEAFSRLEISTPQAKDRLYRDV
KHILGCIRSLPSDDLSRSSTPNWGQLDEFLEQRFGTKAG
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcagccttcccgtcaatcgggaaggtacacattcgaagaagcaatctccaga
gaatctcccaccgcgttaaccaaatcaaattccgatgctgccgcagctgccagtagccag
agcttatcgtcgatcctcaacaacccgcacgtcgccaaatctgattggtggtggtattct
tcttcgtcctcgtctctcgctcctcccgaattcgcgcctctaatctccaaggcctcttcg
gagctcacccgatccgatttctccacctacttcagctcaatctccgatacctacaaccgg
ttcgaggacattcggaaccactccaccaaggatttggagtcctcggcttcggactctcaa
ggccacggcggcgaagcgctcgtcgcgtgcttgcgcgaggttccggcgctttacttcaag
gaggatttcgcgttggaggacggcgcgacgttccgggcggcgtgtccgttctcgacggcg
gccgaaaacctggtcctgcaggagaagcttacgcagtatttggacgtggtggagttgcac
ttggtgaaggagatttccttgcggtccaactcgttcttcgaggcgcagaggcagctgcaa
gacttgaatgtcgagatcgttgaaggatgctcgaggatccgggagttgaaggagacgatt
cggcttttggatgtggatctggtcgattcggctcgacaagttcagcacttgaatgctact
aggactaacttgttggctcttcaccataaattcaatctcattttatacgtcaaacagtct
ctctcagctctcaaattgcttgttgcatctggagattgtgctggagcattggacatcact
gatgatttgcagaatctggtggatggggatgagcttacaggtttacactgttttcgtcac
cttcgagataatgtagcagcttcaattgagtccattaacagcattctttcagcagaattt
atgcgtgctgcaatacaagattctggaaattcagatgtagtaattttgtcacaagtgaaa
gcaagggcttccattccaactaatggaaaagatgatgatcaggttaacttggatgaggaa
gagaccactaattttcgagattgccttcttccaatcataattggattgctcagaactgct
cagcttccctctgtgttgaggatataccgagacacgcttactgctgatatgaaaaatgct
attaagaatgcagtcgcagagctgcttcctgtccttcttgccaggtcagagtcagagttc
tcccctggagagcgaacagttgatgcagatggtggaggtgcatcacttgcaagcaagttg
aggagcctgtcatctgaaagctttgttcaacttttgagtgctattttcaagattgtacgg
gcacatgtagtgcgggcggctgaagtgaaaaaggcgattgagtggatcatgaagaacctt
gatggtcactacgctgctgaatcagttgctactgcaattgcacttggtgctgcagctgca
gaaacaactgaggaccatgatgatcaaggtggttcgcttctgccattttcatctcagaga
gctgccaggttttcttcatttcagggaaaagcaaatgatgccataagtccctcaaatatg
tcaataaatttcagcactgatgtattgcgagaaaacacagaagctgttgttgcagcttgt
gatgctgctcacggaagatgggctaagctcctaggggtccgtgctcttcttcatcctagg
ttgagattgcaggagtttttatgcatatacaacatcacacaggagtttataactgctaca
gaaaagattggtggaaggaggggattcagcatacggggaacactgaactctcaggccaaa
gcctttcttgacttccagcatgactctcgaatggcaaaaataagggcggtgcttgaccaa
gaaacgtgggtggaagtagatgttcctgatgaatttcaggccatcgtcatttcactttgt
agttctgaagcattgatttctgagaaccttgatcatgttcaaaataatgtggaaacaaac
catggtgaagtgattgcattcaatgatggctctcttgtagaagatactgcacaagggaag
cctactcccttggctgaggctgctgataaaaataaagcttctttggctcatagtaacgat
agtaaaatgaaggagcatggaaaatctacatctcaaaccctttcgtacaaaggtgttggt
tatcacatggtaaactgtggcttaatattactgaagatgttgtcagagtacattgatatg
ggcaactttttgccattacggtcttcagaagttgttcaacgagttgtcgaaattcttaaa
tttttcaatacaaggacttgtcagcttgttcttggtgctggtgctatgcaggtgtctggt
ttgaagtctatcacttctaaacacttggccctggcaagtcaagtgatcagttttatatat
gctattatccctgatatcaggagaattctttttctgaaagtacctgagacacaaaaagaa
ttattgctgtcggagattgaccgagtggctcaagattttaaggttcaccgagatgaaata
catacaaagcttgttcagataatgagagaaaggttattagttcatgtgcgtggcttgccc
caaattgttgagggctggaatagacctgaagatgctgatgcacagcccagtcagtttgct
cgttcccttaccaaggaaattggattccttcaacgcgttttatctcggattttacatgat
gtagatgttcaagaaattttcaggcaagtggttattattgttcattcacaagtttcagaa
gcattttcacgcttagagatcagcactccacaagcaaaggataggctgtatcgagatgtt
aagcacattcttggatgtatccgatcattgccttctgatgatttgagtagatctagtact
ccaaactgggggcaattagatgaattcttggagcaaagattcgggaccaaagctggttaa
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