Quercus lobata (valley oak): 115989499
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Entry
115989499 CDS
T07350
Name
(RefSeq) golgin candidate 5
KO
K20286
TATA element modulatory factor
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115989499
Membrane trafficking [BR:
qlo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115989499
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Motif
Other DBs
NCBI-GeneID:
115989499
NCBI-ProteinID:
XP_030969051
UniProt:
A0A7N2LP10
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All DBs
Position
5:complement(21573905..21590095)
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AA seq
995 aa
AA seq
DB search
MAWFGGRVSLGNFPDLAGAVNKLQESVKNIEKNFDNALGFEEKSGDNSESTTEASGLWPS
GTDRKALFDPVMALMGHKSEESTGESSPKAESSEHPPAVEEPSGKPESPQHKSGVEEKEE
NEHGNDRSLHSASEQATTEEENEVPEVDKDAERPGMAEGTDNVISNPDQAESDSLPMPVI
LPEPTSQDGETLESVGNLQENLEVGPSENSELVQAKSGAIEVDQVDSSTILTHEASNVVD
MSESMDEQKTQVESTDKHMLQAEENTETVVPVQAEASIDSHAGGATEPSGLHSVFTEETA
STGESSNDQSPRVLPSDEASARVSESVSPESHEIVKAVEVDQQANDNVTNIKEQELSSGT
NVSDSLDTVLELEKVKKEMKMMETALQGAARQAQAKADEIARMMNENEQLKSVIEDLKRK
SNDAEIESLREEYHQRVATVERKVYALTKERDTLRREQSRKSDAAVLLKEKDEIISQVMA
EGEELSKKQAAQESQIRKLRAQIRELEEEKKGLSTKLQVEENKVESIKKDKAATEKLLQE
TIEKHQTELASQKEYYSSALNAAKEAEALAEARANNEARAELESRLREAEEREAMLVQAL
EELRQTLSRKEQQAVFREDMLRRDVEDLQKRYQASERRCEELITQVPDSTRPLLRQIEAM
QETTARRAEAWTAVERSLNSRLQEAEAKAAAAEERERSVNERLSQTLSRINVLEAQISCL
RAEQTQLSRSLEKERQRAAENRQEYLAAKEEADTHEGRANQLEEEIKELRRKHKQELQEA
LVHRELLQQEIEKEKAARLDLERKARVQSAAASDQIPITRHNSAFENGNLTRKLSSASSL
GSMEESYYLQASLDSSDSFSERRNAGEVTMSPYYMKSMTPSAFEAALRQKEGELASYMSR
LASLESIRDSLAEELVSMTAQCEKLRAESSMLPGIRAELESLRRRHSAALELMGERDEEL
EELRADIVDLKEMYREQVNLLVNKIQTMSSSTSTA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtttggtgggagagtttcgttggggaactttccggatctcgccggagccgtg
aataagctccaggaaagcgtcaagaacatcgagaagaatttcgataatgctctcggtttc
gaagagaagtctggagacaactccgaatcaaccactgaagcgtcaggtttatggccttct
ggcactgacaggaaagcactatttgatcctgtcatggcccttatggggcataaaagtgaa
gaaagtactggagaatcatcaccaaaggcagaatcttctgagcatccacctgcagttgag
gaaccatctggaaaacctgaatctccacagcataaatctggagtagaggaaaaagaagaa
aatgaacatggtaacgacagatctcttcattctgcatctgaacaagccactacagaagaa
gaaaatgaagtacctgaggtagacaaagatgctgagcgtccagggatggcagagggaaca
gataatgtgatttcaaaccctgaccaagctgaatctgattcattacctatgcctgttata
ctacctgaacccaccagtcaggatggtgagacattggaatctgttggcaatctacaagag
aatttagaagtgggaccttccgaaaattcagagttggtgcaagccaagtcaggtgccatt
gaagtagatcaagttgatagtagtaccattttgacacacgaggcgagtaatgtcgttgat
atgagtgaaagcatggatgaacagaagacacaagtagagagcacagataaacatatgtta
caagcagaagaaaatacagagacagtggttccagttcaagctgaggcatcaattgatagc
catgctggaggtgcaactgagccctctggtttacattccgttttcactgaggagactgct
agcactggtgaatcatctaatgatcaatcaccccgtgtacttccttcagacgaggcttct
gcgagagtgtctgaatcagtttctcccgaaagtcatgaaattgttaaagcggttgaagtg
gatcagcaagccaatgataatgtgaccaacattaaagagcaagagttgagctcaggaaca
aatgtctctgactctttagatactgtgcttgaattggagaaggtgaagaaggagatgaaa
atgatggaaactgcattgcaaggtgctgctagacaagctcaggcaaaagctgatgagatt
gcaaggatgatgaatgaaaatgaacaactaaaatctgtgattgaggatttgaagagaaaa
tccaatgatgcagaaattgagtctttgcgagaagaataccatcaaagggttgcaactgtt
gaaaggaaggtttatgctcttactaaggaaagggatacacttaggcgggagcaaagtaga
aaaagtgatgcagctgttcttctgaaagaaaaagatgaaataattagtcaggttatggcc
gaaggtgaagagctttcaaaaaagcaggctgctcaagaatctcagattaggaaattaagg
gctcagattagagagcttgaagaagagaagaaggggcttagcacaaagcttcaggtagaa
gagaataaagtagagagtatcaagaaggacaaggcagctacagagaagttgctgcaagaa
acaatagaaaaacatcaaacagaacttgcatcacagaaagaatattattcaagtgcttta
aatgctgcaaaggaggctgaagcattagcagaggcacgtgccaacaatgaagccagagcc
gaactagagagtcgtttgagggaggctgaggaacgtgaagctatgctagtccaggctctt
gaagaattaaggcaaactctaagtagaaaggagcagcaggcagtgtttagagaagacatg
cttcgtagggatgttgaggatcttcaaaaacgttatcaagcaagtgagcgccggtgtgag
gagttgatcacacaagttccagactctacaaggcctcttttaaggcagattgaggctatg
caggaaactactgccagaagggcagaagcttggactgctgttgaaagatcccttaattct
cgacttcaggaagcagaagccaaagctgcagctgctgaggaaagagagcgatctgtgaat
gaacgcttatctcaaaccttatctcgaatcaatgttcttgaggctcagatttcatgtctt
agagcagaacagacgcagttaagtagatcccttgaaaaggagagacagagagcagctgaa
aataggcaagaataccttgcagccaaggaggaagctgacactcatgaaggtcgtgcaaac
cagcttgaggaagaaattaaggaacttaggcggaaacacaagcaagaattacaagaggca
ctggtgcacagggaactgctacagcaggagatagaaaaggagaaagctgctcggttggat
ttggaaaggaaagctcgtgtccagtctgctgctgcatctgatcaaattcccataacacgg
cacaattctgcttttgagaatggcaatttaacccgaaagctttcaagtgctagcagccta
ggcagcatggaggaaagctattatctgcaagcatctttggactcatcagacagtttctcg
gagaggagaaatgctggagaggtaaccatgagtccatactatatgaagagcatgacacct
agtgcttttgaagctgctcttcgtcagaaggagggtgaacttgcgtcatacatgtctcgt
ttggcatcattggaatctattcgtgattctcttgctgaggagttggtcagcatgacagca
cagtgtgagaagttacgggcagagtcttccatgttgcctggcatacgtgcagagctagaa
tcattaaggaggaggcattctgctgctctggagctaatgggtgaacgtgatgaggagctg
gaggaacttcgtgcagatattgtagatttgaaggagatgtatagggaacaagtaaaccta
cttgtgaataagattcagacaatgagttcatcaacgagtactgcttga
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