Quercus lobata (valley oak): 115989533
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Entry
115989533 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115989533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115989533
03036 Chromosome and associated proteins [BR:
qlo03036
]
115989533
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115989533
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115989533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
115989533
NCBI-ProteinID:
XP_030969099
UniProt:
A0A7N2LQH6
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Position
5:34881857..34896555
Genome browser
AA seq
1073 aa
AA seq
DB search
MTSPSLIPVSSGVSSEHHGTRKNMSFSNSCGLDVDVGMSSEVVSQYKKRRMSQNTDFLSC
EVSRDIEAMLPTLRSADYYMKPCLKELATRELMDPGYCSRVLDFTIGRVGYGSVKYLGET
DIRQLELDEIVKFRRHEVVVYEDENTKPVLGQGLNKAAEVTLVLQVRSLDLEKGKLKMIV
DKLRMSVERQGARFISFDPAGGEWKFSVQHFSRFGLSDDEEEDIVMDDAAVVQNPVGKND
GEIYDLDDETQVDTTGVLLSHSLPAHLGLDPVRMREMKMLMFPDEEGEAEDFDDEMPTHK
KPSFGKEYIRPPLHSSAQRMSHRSSPPVARKTPLALLEYNHGSSDSNPPGAILMAQQNKG
LSLKPMKPEGSGFKLDLKQETPVTRSHSCNIVDAGLFMGRSFRVGWGPNGVLVHTGVPVA
SNNSQRVLSSVINLEKVAIDKVVRDENNKVREELVDLAFDSPLNLHKEINHVTEEVEVGS
FKLRLQKLVSDRIMLSEICRSYGDIVERRLEVPGLSSSTRVVLSHQVMIWELIKVLFSDR
ESSAQLKSLGADNEEDMMQDIKEASSEVDPEALPLIRRAEFSLWLQESVCPRVQDTISSV
NESNYLEHIFILLTGRQLDAAVELAASRGDVRLACLLSQAGGSMVNRADVAQQLDLWKIN
RLDFSFIEKDRLRLYELLAGNIHGALHGGKVDWKRFLGLLMWYQLPPDTSLPIVFHSYQH
LVDIGKATYPVPVYIDEGPVEEAVKWSTKERFDFSYYLMLLHASEEGEFSFLKAMFSALS
STHDPLDYHMIWHQRAVLEAIGAITTNDLHVLDMGLVSQLLCVGKCHWAIYVILHMPYRE
DFPYLHANLIREILFQYCESWSSEESQRQFIENLGVPAVWLHEAMAVYFNYYGDFSKALE
HFLQCAHWQKAHSIFILSVAHKLFLSAKHSEIWRLATSMEDHKSEIENWDLGAGIYISFY
LLRSSFEEDNVSMSELDSIESKNAACRDFLGRLNESLAVLGGKLQVDARIAYSKMAEEVC
GLLLSDIGEGSTCDDQLSCFDTSFSAPIPEDLRSSYLQGAVSVFTCFLSEVAT
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgacatctccttctctaatcccggtttcctccggggtttctagtgaacatcatggtaca
agaaaaaacatgtcatttagtaattcctgtggcttggacgttgatgtgggaatgagttca
gaagttgtatctcagtacaagaaaagaaggatgtctcaaaacactgattttttgtcgtgt
gaggtttctagagatattgaagctatgttacctactttgaggtcggctgattattatatg
aagccctgcttgaaggagttggctactcgggagcttatggaccccggttattgtagccga
gttctggatttcacaattgggagggttggttatggatcggtcaaatatcttggggagact
gatatacgacagttagaattagatgaaattgtgaagttccgtaggcatgaggtagttgtg
tatgaagatgaaaataccaagcctgtgcttggacaggggcttaacaaggctgctgaggtg
actttggtgcttcaagtaagatcactggatttggagaaggggaaactaaagatgattgtg
gataagttaagaatgagtgtggagagacaaggggctcgcttcatttcgtttgacccagca
ggtggtgaatggaaattctcagttcaacatttcagcagatttggattgagtgacgatgaa
gaagaagatattgtaatggatgatgctgctgtagttcaaaatcctgttgggaagaatgat
ggtgagatttatgatcttgatgatgaaacccaggtagacaccactggtgttctgctttct
cactctcttcctgctcatcttgggcttgatcctgtaaggatgagagaaatgaaaatgttg
atgtttcctgatgaggaaggggaggcagaggattttgatgatgaaatgcctacacataag
aagccatcttttggtaaagaatacataagacctcctttacacagttctgctcagaggatg
agccatagatctagtcctccagttgctcgaaaaaccccgttagcactgctcgagtacaac
catggtagttctgactcaaaccctcctggggccattctgatggcccaacaaaataagggt
ctctcactgaagccaatgaaacctgaaggttcaggttttaagctagacctcaagcaagaa
acaccagtaactagaagccattcttgcaacatagttgatgcaggattgttcatgggtagg
tcatttcgagttgggtggggcccaaatggggtccttgttcacactggtgtaccagtagcc
agtaacaattctcagagggtgttatcctctgtaatcaatttagagaaggttgctatcgat
aaagttgttagagatgaaaataataaagtcagagaggaacttgttgacttggcttttgat
tctccattaaatctccacaaggagataaatcatgtaacagaagaagttgaagttgggtcc
ttcaagctgaggcttcaaaaacttgtctcagatcgcatcatgctttcagagatttgcagg
agttatggagatattgttgagaggaggttggaggttcctgggctatcctcctctacccgt
gtagttttgtctcaccaagtaatgatatgggaattgataaaagttcttttttctgatagg
gaaagtagtgcacaattgaagtccttgggtgctgacaatgaggaagacatgatgcaagat
ataaaggaagcttcttcagaagttgacccagaagcactccctcttattcgaagagcagag
ttcagcttatggttgcaagaaagtgtttgtcctcgtgtgcaagatacaataagctcagtg
aatgaatcaaattatttagaacatatattcatactcttgactgggcggcagcttgatgca
gctgtggagctggctgcttctagaggagatgtgagattggcttgtttattaagtcaggct
ggtgggtccatggtgaatcgtgctgatgttgcacagcagcttgatctttggaaaatcaat
aggctggatttcagtttcattgagaaggaccggttaaggctttatgaattgctcgctggt
aatattcatggtgctttgcatggtgggaaagttgactggaagaggtttctaggtttattg
atgtggtatcaactaccacctgacacttccttgcccattgtttttcacagttatcaacat
cttgttgatattggaaaggctacatatcctgttccggtatacattgatgaaggaccagta
gaagaggctgttaaatggagtacaaaagaacgttttgacttctcgtattatcttatgctg
cttcatgccagtgaagagggagagtttagcttcttaaaggctatgttcagtgccttatct
tcaacacatgatcctcttgattaccatatgatctggcatcagcgtgcagtgttggaagca
attggtgctatcactactaatgatcttcatgttcttgacatgggacttgtctcgcagctg
ttgtgtgtggggaaatgccactgggccatctatgtgattcttcatatgccctaccgtgaa
gatttcccatatctgcatgctaatcttattcgggaaatcttgttccagtactgtgaatca
tggagttcagaagaatcgcaacgccagtttattgagaacttgggtgtaccagctgtgtgg
cttcatgaggctatggcagtttacttcaactactatggggacttctcaaaggcacttgaa
cattttcttcaatgtgcacattggcaaaaagctcattctattttcatattgtcggttgct
cataaattgttcttgtcagccaaacactcggagatatggaggcttgctacatctatggag
gaccacaagtcagaaattgaaaattgggacttgggagctggaatttatatttcattctat
ctattgagaagttcatttgaggaagataatgtttccatgagtgaactggattctattgag
agcaaaaatgctgcttgtagagactttcttggtcggttaaatgagtctttggcagttttg
ggtggcaaattacaagttgatgcaagaatagcttattcaaaaatggcagaggaagtttgt
ggtttgcttctttctgacattggagaaggctcaacatgtgatgatcagttaagctgcttt
gacacttctttcagtgctcctattcctgaggacctacgctcaagttatttgcagggtgca
gtatctgtttttacatgctttctttcagaggtggctacatag
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