Quercus lobata (valley oak): 115989605
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Entry
115989605 CDS
T07350
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115989605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115989605
Enzymes [BR:
qlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
115989605
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
115989605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
115989605
NCBI-ProteinID:
XP_030969241
UniProt:
A0A7N2LLV6
LinkDB
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Position
5:19735821..19742458
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AA seq
775 aa
AA seq
DB search
MVSSEGLSSSPAPPAAAATVAVAKKYGVTEPISMAGPTRADRQRSRDLEKFLVDAGLYES
KQEAEKREEVLHRIRQIVKDWVKQLTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDI
DTLCVGPSYVNREEDFFFILHNILAEMEEVTELQPIPEAHVPVMKFKFDGLSIDLLYASI
SLLVVPEDLDISDVSVLYNVDEPTVRSFNGCRVADQILKLVPNVEHFCTTLRCMKFWAKR
RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEE
ELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQHGNKICGEIEL
NKAQWSDLFQPYFFFESYKNYLQVDIVAVDTDDLLAWKGWVESRLRQLTLMIERDTFGKL
QCHPYPHEYVDTSKQCAHCAFFMGLQRKQGEMVQEGQQFDIRGTVDEFRQSVNMYSYWKP
GMEIYVSHVRRRQIPSYVFPDGYKRTRPSRPTAQQQADKSSHEYGEVGGTGSSERCLKRK
NSSDAVDVKQGMPVKRLSISPQRRDSISPDIISNKLSSVSSDNLASHSGGNNATAERNRT
WQVDTGKVEDLASNCRITGTGSVEQDRSSMEGAKRSNLELVEAQKRMLCPEAETAGCASN
SSIITTTPASEVSSCEDAGFGSVVGSSEGNTGSVEGSIEGSNNIGSSVADSCEAHSISPL
ENGCIYGDGVLQDGYQEELEPNAAVGMVINSRGEANLEAVEKPVQAEFNVNGVKD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcagaagggctgagttcctcgccggctcctccggcggcggctgcgacggtg
gcggtggcgaagaaatatggcgtaacggagccgatatcaatggcggggcccaccagagcc
gatagacagagaagcagagacttagagaagttcttggtggatgcggggctttatgagagc
aaacaagaagctgagaagagagaggaggtgcttcatcgtattcgtcagattgtaaaagat
tgggtaaagcaacttactcggttgagaggatacacggaccaaatggtggaggatgcaaat
gctgtgatttttacttttggttcatatcgacttggggtacatggccctggggttgacata
gacactttatgtgttgggccatcatatgtgaatagggaggaagacttcttctttatactg
cacaatatcctggcagaaatggaagaagttactgaactacaaccaattccagaagctcat
gtcccagtaatgaaattcaagtttgatggactttccattgaccttctttatgcaagtatt
tctctcttggttgtgccagaagacttggacatctctgatgtgtctgtattgtacaatgtc
gatgagcccactgttcgaagttttaacggctgcagggttgcagatcaaattcttaagctt
gttccaaatgttgagcatttttgcacaacactccgatgcatgaagttttgggccaaaagg
cgtggcgtttattccaatgtgactggatttcttgggggtgtgaactgggcacttcttgta
gctcgtgtgtgccagctttatcctaatgcagttcctagtatgcttgtctctcgatttttt
agggtttatacgcagtggcgttggccaaaccctgtgatgttatgtgcaattgaagaggaa
gaacttggattttctgtatgggatcctcgtaagaatcctcgagaccggactcatcacatg
cctatcataactcctgcttacccatgcatgaattctagctacaatgtttcaacaagcacc
cttagggttatgatggagcagttccaacatggtaacaagatttgtggggagatagaactc
aataaagctcagtggagtgatctatttcagccatacttcttctttgaaagctacaagaac
tatctgcaggttgacatagttgcagttgatactgatgacttgcttgcttggaaaggctgg
gttgaatctaggctgaggcaattgactctgatgattgagcgggacacatttgggaagttg
caatgccacccttatcctcacgagtatgtggatacatcaaagcagtgtgcccattgtgcc
ttttttatgggtttgcaaaggaaacagggggagatggtccaagaaggtcagcagtttgat
atccgtgggactgttgatgaattcaggcaatctgtaaacatgtactcgtattggaaaccg
gggatggaaatttatgtttctcatgttcgtagaaggcaaattccttcatatgtgtttcca
gatggttataaacgaactcgaccctcaaggcctacagcccagcagcaggctgataaatca
tctcatgaatatggtgaagttggcgggactggctccagtgagagatgccttaagaggaaa
aacagttctgatgcagtggatgtgaaacaaggcatgcctgtaaaacggctatctattagc
cctcagagacgggattcgatttctcctgacattatcagtaataagttgagcagtgtgtct
tcagataatttggcatctcattcagggggaaataatgcaactgctgaaaggaacagaact
tggcaggttgacactggtaaagtggaagatttggcatcaaattgcaggattactgggact
gggtctgtcgagcaagatcggagctcgatggagggtgctaaaaggtccaatttggagcta
gttgaagctcaaaaaaggatgctatgcccagaagctgagacagcaggatgtgcctcaaat
tccagtattatcactacaacccctgcaagtgaggtcagttcctgtgaagatgctggattt
ggatcagtggtaggtagcagtgaggggaatactgggagtgtggaaggaagcattgaaggg
agtaataacataggatcttctgtggctgattcgtgtgaggcacactcaatatctcctttg
gagaatggatgcatttatggcgacggagttctacaagacggatatcaggaagagttagag
ccaaatgctgcagttgggatggtaatcaattctaggggtgaagcaaacttggaagctgtg
gagaaaccagttcaggctgagtttaacgtcaacggcgtgaaagattag
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