KEGG   Quercus lobata (valley oak): 115989732
Entry
115989732         CDS       T07350                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115989732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115989732
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115989732
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA FHA_2
Other DBs
NCBI-GeneID: 115989732
NCBI-ProteinID: XP_030969425
LinkDB
Position
5:complement(75143866..75151327)
AA seq 658 aa
MPQSQIGYLVPLTQNLDQEDTSIPKLSLSKGPNVIGRHNVPISDKRLSRKHLTVTVSTTA
SANLFVEGSNPIVVNSGNKRKKLYSQESTTIVDGDVVELIPGHHFFKYVTWAGDKGEEPS
LKRSRQTFDNVALTTKSQDEVKKKSLGQGSGVEVENYGKYNSKGESREEAIRNFRVSNDK
LPWTFRLLRVRELPAWSNTSCVSIGDVIQGDVLVAIVSNYMVDIDWLLPACPTLAKTPHV
LVLHGEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAMLLVYPRGVRIIVHTANLIY
VDWNNKSQGLWMQDFPWKVQNSPSKRCGFENDLIDYLSALKWPEFSVKLPALGNFNINPA
FFKKFDYSDAAVRLIASVPGYHTGTNLKKWGHMKLRTVLQECTFDNNFKNSPLAYQFSSL
GSLDEKWLAELTYSMSSGFSEDKTPLGLGQPRIIWPTVEDVRCSLEGYAAGNAIPSPLKN
VEKEFLKKYWAKWKASHTGRCRAMPHIKTFTRYNGQKLAWLLLTSSNLSKAAWGALQKNN
SQLMIRSYELGVLFLPSSFERYGSGFSCTSNGDIKEDKCRSLENSEVRRTKLVTLTWQGS
RNSDSSSDVIPLPVPYELPPQPYTSEDVPWSWDRRYTKKDVYGQVWPRQVQLYTFQDS
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcctcaatctcagattggatatttggttccgctaactcaaaatctagaccaagaagac
acttcaatcccaaagctctctctctccaaaggcccaaatgtcattggccgccacaatgtt
cccatttcagacaagaggctcagccgcaagcacctcactgtaaccgtttccaccaccgct
tctgccaatttgtttgtggagggttcgaatcccattgtggttaattctgggaataagaga
aagaagctgtattctcaagaaagcactaccattgttgatggtgatgttgtggagcttatt
cctgggcatcattttttcaagtatgtgacatgggctggtgacaaaggagaggaaccaagt
ttaaagaggtcgcgtcaaacatttgacaatgtagctttgacaacaaagtcacaggatgag
gtgaaaaagaaaagcttaggacaagggagtggcgtggaggttgaaaattatgggaagtac
aattctaagggagagagtagggaggaggctatccgtaattttcgtgtttctaatgacaag
ttaccttggacatttcgacttttgcgagtgagagagctgccagcttggtcaaatacctct
tgtgtttctattggggatgtgattcagggggatgttctcgttgcaatcgtttcaaattat
atggtagacattgattggttgttaccagcatgtccaacacttgcaaaaacccctcacgtg
ttggttcttcatggggaaggtgatggcacattggatcacatgaagagaaagaagccggca
aattggattctgcataaaccccccttacctatttcatttgggacacaccattcgaaggcc
atgcttcttgtatatcctcggggagtgaggattattgtacatacagcaaatttaatatat
gtagattggaacaacaaaagccaaggtttgtggatgcaagatttcccctggaaagttcaa
aatagtccaagcaaaagatgtggatttgaaaatgacttgattgattatctcagtgccttg
aagtggcctgaattctctgttaaattaccagcacttggaaacttcaatatcaatccagct
ttcttcaagaagtttgattatagtgatgcagcggtcagattgattgcttctgtccctgga
tatcatactggtaccaatttgaagaagtggggtcatatgaagctacgaactgttctccag
gaatgtacttttgataacaattttaaaaattccccactggcttatcagttctcttccctt
ggttctttggatgagaagtggctggctgagctgacttattcaatgtcatcaggcttctca
gaagataaaacacctcttggtcttggacaaccacgtattatatggcccactgtggaagat
gtcagatgctctttagagggttatgcagctggcaatgccattccaagtccactaaagaac
gtggagaaagaattcttgaagaagtattgggcaaagtggaaggcaagccacactggtcgc
tgtcgtgcaatgccacatataaagacattcacccggtataatggtcagaaactcgcttgg
ttattgttgacttcatcaaatcttagcaaagctgcctggggagctctccagaaaaataat
tctcagttgatgatccgttcttatgagctgggagtgctatttttgccatcttcttttgaa
agatatggttctggattttcttgtacaagtaatggggatataaaggaggataaatgcaga
tcattagaaaattctgaagtacggagaacgaaactagtgactctgacttggcaaggaagc
agaaattcagactcttcatctgatgtaattccattacctgtgccttacgaactccctcct
caaccatatacttctgaagatgtaccctggtcttgggatcggcgatataccaagaaagat
gtttatggtcaagtttggccacgacaagtccagctttatactttccaggattcctga

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