Quercus lobata (valley oak): 115990086
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Entry
115990086 CDS
T07350
Name
(RefSeq) piRNA biogenesis protein EXD1-like
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115990086
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115990086
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
KH_KhpA-B
KH_1
DNA_polI_exo1
KH_2
Motif
Other DBs
NCBI-GeneID:
115990086
NCBI-ProteinID:
XP_030969810
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Position
5:17267709..17276737
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AA seq
322 aa
AA seq
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MAFASPYQTYIPLPSDSGGEDDGHEAHLSLVPIHIVTHASQLPIEFLSPSPEKQLVVGFD
CEGVDLCRYGTLCIMQLAFSDAIYLVDAIQGGEKLMKACKRALESNFITKVIHDCKRDSE
ALYFQYGIKLHNVVDTQIAYYLIEEQQGRTRAPDDYISFVGLLADPRYCGISYTEKKEVR
VRLKQDPKFWTQRPLSESMVRTATDDVRFLLYIFYKMMEKLNERSLWQLAVRGALYCRCF
CYTDNEYADWPSIPTIPGFFFFFLPVTLGSSFIVEHREYYITVEESAPEQEILSVLNIPP
GKMGLVIGRKGASILSIKNSCK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgcttcaccctaccagacatacatacctttgccttctgactcaggtggcgaa
gatgatggccatgaggcacatttgtcactggttccaattcacatagtaactcatgcttcc
caacttccaattgagtttctttctccttctcccgaaaagcaattggttgttggatttgat
tgtgagggtgttgacctgtgccgttatggaactctttgcatcatgcagcttgcattttca
gatgccatatatttggtcgatgccattcagggaggagagaagctaatgaaagcctgtaag
cgagctcttgaatctaacttcatcacaaaagtcattcatgactgcaagcgagatagtgag
gcattgtactttcagtatggaatcaagttgcataatgtggtagatacacagattgcatat
tacctaatagaggaacaacaggggcggacaagagcgccagatgactacatttcttttgtt
ggactccttgctgatccacgctattgtggtatatcatatactgagaagaaagaggttcgt
gtccgtctaaagcaggatccaaaattttggacacagagacccctatctgaatcaatggtc
cgcacagctactgatgatgtccgcttcctcctctatatcttctacaagatgatggaaaag
ttgaatgaaagatctttatggcaacttgctgttcgtggtgcactttattgccggtgtttt
tgctacactgataatgaatatgcagattggccttcaattcccactattccaggttttttt
tttttttttttacctgttactctggggtcatcatttattgtagaacatagagaatattac
atcactgtggaagagtctgctcctgaacaagagattttgtcagtgcttaacattcctcct
ggaaaaatgggacttgtaattggtagaaaaggagcttccatcttgtcaatcaaaaactct
tgcaagtaa
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