Quercus lobata (valley oak): 115990278
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Entry
115990278 CDS
T07350
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115990278
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
115990278
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
115990278
Prokaryotic type
115990278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
115990278
NCBI-ProteinID:
XP_030969985
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Position
5:complement(21178542..21185213)
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AA seq
992 aa
AA seq
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MPLPQVSSLNLNLRLLFPLLSPFKPSSLSYLKPINHSSSLFTILASSKRHRNIPPPHHLK
PNLARRNTSTLSSSDQQKVAPMETTTEPQPSVGFNKRRAEGRDKSDKPHKNLQLKVRKLN
PVNTISYVQILGTGMDTQDTSPSVMLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFL
SRVCSETAGGLPGLLLTLAGMGDEGMSVNVWGPSDLKYLVDAMKSFIPNAAMVHTRSFGP
MLSSDTASMPDSSQFQEPIVLIDDEVVKISAILLRPSCLDRSPHLNEEPVMQNPSERGLD
ERMDPNGKTGSIMKPGDMSVIYVCELPEIKGKFDPAKAVSLGLKPGPKYRELQLGNSVKS
DRQNITVHPSDVMGPSVPGPIVLLVDCPTESHLQELLCVQSLSSYYVDALGNLPESAKTV
TCIIHLSPASVISGSNYQRWMQRFGSAQHILAGHEMKNVEIPILKSSARIAARLNYLCPQ
FFPAPGFWSLQQLNYSAPESSASSEGPVSKLCESIAAKNLLKFTLRPYAHLGLDRSGIPN
SATPTEIIDELVTEIPEIVDAAQCVSQFWHGSRETEETTSLQDSKVFVEEPWLNENSLPG
CLENIRRDDLEIVLLGTGSSQPSKYRNVSSIFINLFAKGSLLLDCGEGTLGQLKRRYGVE
GADDAVRHLRCIWISHIHADHHTGLARILALRRDLLQAVPHEPLLVVGPRQLKRYLDAYQ
RLEDLDMQFLDCKHTTAASLDAFEGFIESNKDHSSPESPINVEDTTNKILDGPTGQNIDC
TLFARGSQMQSYWKRPGSPVDNRMAFPILKTLKKALSEAGLEALVSFPVVHCPQAFGVAL
KAAERINSVGKVIPGWKIVYSGDTRPCPELIEASHGATVLIHEATFEDGMVDEAIARNHS
TTMEAIEVGDSAGAYRIILTHFSQRYPKIPIFDETHMHKTCIAFDMMSVNIADLPVLPKV
LPYLKLLFKNEMIVDESDDIVDDAVEAVHVGS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgccactgccccaagtctcaagcctcaacctcaatctccgcctcctcttcccacttctt
tctccctttaaaccctcttctctctcctaccttaaacccatcaaccattcttcttccctc
ttcaccattctcgcctcctctaaacgacaccgtaacattcctcctcctcatcacctcaaa
cccaatcttgctcgcagaaacaccagcactctgagcagtagtgaccaacaaaaagtggct
ccaatggaaacaacaactgagcctcagccttctgttgggttcaataagagaagggctgaa
ggtagagacaagagtgataaaccccacaagaacttgcagttgaaagtgcgcaagctcaac
cctgtcaataccatttcttatgtgcagatattggggacaggaatggatactcaggataca
tcaccttcagtcatgcttttctttgacaagcaaagatttattttcaatgctggagaggga
ttgcaacgattttgcacagagcataagattaagttatcaaagatagatcacatatttctc
tctcgtgtctgctcagagactgcaggtggtcttccaggtttactattgactttggctggc
atgggagacgaaggaatgtctgtcaatgtttggggtccatcagatcttaaatatctagtt
gatgccatgaagtctttcatcccaaatgctgccatggttcacactcggagctttgggccc
atgttaagttctgatactgcttctatgcctgattcaagtcagtttcaagaacccattgtt
ctcattgatgatgaggttgtcaagatatcagccattctcctacgaccaagttgcttggat
aggtctccacacttgaatgaagaacctgtcatgcagaatccttcagaaaggggtctagat
gagagaatggatccaaatggaaaaacagggtctataatgaagcccggtgatatgtctgtg
atatatgtctgtgaattgcctgagattaaggggaaatttgacccagccaaagctgtgtct
cttggtcttaaacctggcccaaagtatcgtgaactgcaactcggaaattcagtgaagtca
gatcgccaaaatatcacggttcatccaagtgatgtaatgggtccttctgttcctgggccc
attgtactccttgttgactgccccacagaatctcacttgcaggagttgttgtgtgtacaa
tctctcagtagttactatgtagatgccttgggcaatctaccagagagtgctaagactgtt
acttgtatcattcatttaagtcctgcatctgtaataagtggttcaaattatcagagatgg
atgcaaagatttggttcagcccaacacatcctagctggacatgaaatgaagaatgtggag
attccaattcttaaatcaagtgcacgaattgcagcacgtctcaattacttgtgccctcag
tttttcccagctccaggtttttggtctcttcagcagcttaattactcagcaccagagtcc
agtgcttcaagtgagggtccagtttcaaagctgtgtgaaagcattgctgccaaaaatctc
ctcaagttcactttgcgtccttatgctcaccttgggttggatagatctggtattccaaat
tcagcgactcccacagaaatcattgatgagttagtgacagagattccagagattgtagat
gctgcccaatgtgtcagtcagttctggcacgggtccagagagacagaggagacaacttcc
ttgcaagatagtaaagtttttgttgaagagccatggttgaatgagaattctcttcctggc
tgtttggagaatataagaagagatgacttagagattgttcttcttgggactggttcatcc
cagccatctaaataccgtaatgttagttcgatcttcattaatctttttgcaaaaggaagt
ttgctcttagattgtggcgaaggaaccctaggacagttgaaaaggagatatggtgtagag
ggtgcagacgatgctgtgagacatctaaggtgtatttggatctctcacattcacgctgat
caccacacgggtttggcaagaatacttgctctgcggcgtgatctgttacaggcagtgcct
catgaaccattacttgttgtaggcccaaggcagcttaagagatatttagatgcataccaa
agacttgaagatttagatatgcagttccttgattgtaagcacactacagcggcttcattg
gatgcttttgagggttttattgaatcaaataaagatcactcttctccagaaagtccaatt
aatgtcgaggatacgaccaataaaattttagatggcccaacaggacagaacattgattgt
actctgtttgctagaggatcccaaatgcagagctattggaagagaccaggtagtccagtt
gataataggatggcttttccaatcctaaagaccttgaagaaagcgctaagtgaagctggt
ttagaggccttggttagttttcccgttgtgcactgtccacaggcatttggtgttgcattg
aaggcagcagagagaatcaatagcgttggaaaagtgataccagggtggaagattgtgtac
tcaggcgacaccaggccctgcccagaattgatagaagcatcccatggtgcaacagttctt
atacatgaggctacttttgaggatggcatggtggatgaggctatagcaagaaaccatagc
acaacaatggaagcaatagaagttggggactctgctggggcgtaccgcattatccttacc
cacttcagccagagatatccaaaaattccgatatttgatgagacacacatgcataagact
tgcattgcgtttgacatgatgagtgttaatatagcagatttgccagtacttccaaaggtt
cttccatacttaaaactgctttttaaaaatgagatgatagttgatgagtctgatgatatt
gtagatgatgctgtagaggctgtacatgttggttcataa
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