Quercus lobata (valley oak): 115990330
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Entry
115990330 CDS
T07350
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Module
qlo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115990330
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115990330
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Herpes_UL73
Motif
Other DBs
NCBI-GeneID:
115990330
NCBI-ProteinID:
XP_030970028
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Position
5:complement(30784919..30798945)
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AA seq
516 aa
AA seq
DB search
MDSHYDIEFVFPNDEPPFDSSSSDDELELTLAIAIEELNNEGAATSRRRSIQPRRFIWYN
PLQDHDRLFQDYFAKTAVYPPNQQKMNKSQNANQFYKMATVNQFYKSQMESFAIVRIMIL
VLVTIICGIGEAAQVEYFNVMDYGAKGDAITDDSVAFLKAWNDTCNSETDEPTMVIPRRQ
FFLRPTTFRGPCKSKVHFAILGVLFAPSGPKEWKELNDTVKFIEFEYVNGLYIHGVGLIN
GRGKGWWDISCRYHPDLKECGKGAPTALRFHKSNDIHMSQIRIIDSPQTHILLLGCNDVE
FEGLFIKSPDGSPNTDGIHIQATNNVFINSSFIGSGDDCVSIGDGISNVNITYVTCGPGH
GISIGSLGGSGNVVNVSNIHVRHAIFNGTQNGARIKTYQTGRGEVRDVEFSDIKFIDAGN
PIIIDQYYCGNPNGCPPTNVGVQISNVSYTDMYGTSKADVAVNFNCSGNVACTDIKLENI
NLTSSTIGKQVTSSCNNAYGEAKGTIEPKSCLNSKT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggattcccattatgacattgagtttgtttttccaaatgatgagcctccatttgactcg
tcttcttctgatgatgagttggaacttactctagctattgccatagaagaattaaacaat
gaaggagcagcaacatcacgtcgtcgttctattcaacctcgcaggtttatctggtataat
cctttgcaagatcatgacaggcttttccaagattattttgctaaaacagcagtgtatcct
cctaatcaacaaaagatgaacaagtcacagaatgctaatcagttctacaaaatggccact
gttaatcagttctacaaatcacagatggagtcctttgctattgtacgtatcatgatcttg
gttttagtgacaataatttgtggtattggggaagcggctcaagttgaatattttaatgtt
atggattatggagccaaaggagatgccattacagacgattctgtggcatttttaaaggca
tggaatgatacatgtaattccgagaccgatgaacctactatggttattccaagaaggcaa
tttttcttgcgacccacaacctttcgtggtccttgcaagtctaaagttcattttgctatt
ttgggagttttatttgcaccttctggtccaaaggaatggaaagagttgaatgatactgtg
aaatttatagaatttgagtatgtgaatgggctctatatacatggggttggcctaataaat
ggtcgtggaaagggttggtgggatatctcatgcagatatcatcctgaccttaaggaatgt
ggcaaaggtgcacccacggcactcagatttcataagagtaatgatatccacatgagccag
attagaataattgatagtccccaaacccatattcttttactgggatgcaatgatgttgaa
ttcgaaggcctattcataaaatcaccagatggaagcccaaacactgatggaattcatatt
caagctacaaataatgtattcatcaacagttcctttattggctctggtgatgattgtgtc
tctattggagatggaatttcaaatgtaaacatcacttatgtcacgtgcgggccgggtcat
ggaataagcattggaagtttaggcggaagtggaaatgtggtaaatgtatcaaacatccat
gtgaggcatgctatcttcaatgggacacaaaatggggcacgaatcaagacatatcagact
gggagaggtgaagttcgggatgttgagttttcagatataaaattcatagacgctggaaat
ccaataatcatcgaccaatactattgtggcaaccctaatggctgcccaccaacaaatgtt
ggagttcaaataagcaatgtgagctacacagacatgtatgggacatcaaaggccgatgta
gcagtcaattttaattgcagtggaaatgttgcttgcaccgacatcaaattggaaaatatc
aacttgacatcttcaacaattgggaagcaagtcacttctagttgcaacaatgcttatgga
gaggcaaaaggaacgattgaacccaagtcctgtctaaattcgaaaacttga
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