Quercus lobata (valley oak): 115990743
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Entry
115990743 CDS
T07350
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03015
mRNA surveillance pathway
qlo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115990743
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115990743
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115990743
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115990743
03036 Chromosome and associated proteins [BR:
qlo03036
]
115990743
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115990743
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115990743
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115990743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
TOR1L1_N
Adaptin_N
Cnd1
CLASP_N
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
115990743
NCBI-ProteinID:
XP_030970399
LinkDB
All DBs
Position
1:44117285..44137806
Genome browser
AA seq
601 aa
AA seq
DB search
MGFSCNSFTPFKLITDSSLSLRPRTLGSEAAGRNALRSLRLNSIRRLSTIARALGEERTR
KELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVREKA
VESLCRIGSQMRETDLVDWFIPLVKRLAAGEWFTARVSACGLFHIASPSAPEMLKTELRS
IYSQLCQDDMPMVRRSAATNLGKFSATVESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGC
ATLGKLLEPQDCVAHILPVIINFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYV
RLLRDNEAEVRIAAAGKVTKFCRILNPELSIQHILPCVKELSSDSSQHVRSALASVIMGM
APVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELA
EDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAATNNLKRLAEE
FGPEWAMQHIVPQVLDMITNPHYLYRMTILRAISLLAPVMGSEITISKLLPVVINVSKDR
VPNIKFNVAKVLQSLIPIVDHSVVEKTIRPCLVELCEDPDVDVRFFANQALQSVDHVIMS
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttcatgcaattcattcacaccattcaagctcatcacagattcatctctctct
ctacgcccacggactctgggatcagaggcagccggcaggaacgcattgagatcgctacga
ttgaactcgattcggaggctatctacaattgcccgtgctcttggggaggagcgaaccaga
aaggaactgatcccatttctgagtgaaaacaatgacgacgatgatgaggtacttcttgca
atggcagaggaattgggggtgtttattccatatgttgggggagtggagcatgcccatgtt
ttgctcccaccgttggagaccctttgcactgttgaggaaacctgtgtgagggaaaaagcg
gtggagtcattgtgtagaattggctctcagatgagagagactgacttggttgactggttt
attcctctggtgaagagattggcagctggtgaatggtttacagcacgagtctctgcatgt
gggttgtttcatattgcctccccaagtgccccagagatgctgaagacagaattgcggtca
atatacagtcaattgtgtcaggatgacatgcctatggttaggaggtctgctgcaacaaat
ctgggaaaattttctgcaactgttgaatctgctcatctgaaaactgacatcatgtcaatg
tttgaggatcttacgcaggatgatcaagattctgttcggttattggccgttgaaggttgt
gccactcttggaaagttgttggaacctcaggactgtgttgcacatattctacctgttatc
ataaatttctctcaggataagtcttggcgtgtgcgttacatggttgctaatcagttatat
gaactttgcgaagctgtggggcctgagcctactaggacggacttggtccctgcatatgtc
cggttgcttcgggataatgaggctgaagtacgtatagcagctgctggcaaagtaactaag
ttttgccggattttaaatcctgaactttcaattcagcatattcttccttgtgtgaaggaa
ttgtcatcagattcttcccagcatgttcgttctgctttagcttcagttataatgggaatg
gctcctgtattaggaaaggatgccacaattgaacagctccttccaattttcctttctctt
ctgaaggatgaatttccggatgtacgccttaatattattagcaagcttgatcaagtgaat
caggtcattggaattgatctgctctctcaatccttgttaccagccattgttgagcttgct
gaggatagacattggagagtaaggctagcaataatagagtatatacctttattggcaagt
caattaggtgttggattttttgatgacaagctaggtgctctttgcatgcagtggttacag
gataaggtttactcaattcgtgatgcagctactaacaacttgaagcgacttgcagaagag
tttggcccggagtgggcaatgcagcacatagttccacaggttttggatatgattaccaat
ccacattatttgtatcgaatgaccattctgcgtgcaatttccctccttgccccagtaatg
ggctcagaaatcacaatttcaaagttgttgccagtggttatcaatgtatcaaaggacagg
gtaccgaacatcaagttcaatgtggcaaaggtgcttcagtcactcatacctatagttgat
cattctgtagtggagaagacaattcgtccctgtttggtcgagctatgtgaggacccggat
gttgatgtccgattttttgccaaccaagcgcttcagtcagttgaccatgttattatgtct
agctag
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