Quercus lobata (valley oak): 115991447
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Entry
115991447 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115991447
KO
K07456
DNA mismatch repair protein MutS2
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115991447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115991447
DNA repair and recombination proteins [BR:
qlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115991447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
SR_plectin_7
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
115991447
NCBI-ProteinID:
XP_030970998
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Position
5:39936382..39946229
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AA seq
914 aa
AA seq
DB search
MQLTNLLFTSVAHKAPPVLFPKVKALNSNSPESLTLSQTLQSETLETLEWPSLCKQLSSF
TSTTMGFSAAQKAKIPLGQTPEESHKLLDQTAAAASAMMDSPPLDFSGIEDVSGILNSAV
SRELLSISELCAIRRTLRAAKLLFEKVKQLVNTGDCSETERYLPLLEILKHCNFQVELEH
KIGFCIDCNLLIILDRASEDLEIIRSERKRNSESLDSLLKGVSSQIFQAGAIDRPLITKR
RSRMCVGIRASHRHLLPDGVILNVSGSGATYFMEPKEAIELNNMEVKLSNSEKAEEIAIL
SLLTSEIAESEIEIRYLLDRILEVDLAFARAAYAQWMNGVCPIITSQGCEAINFSEEEDC
ALSVDIDGIQHPLLLESSLRSSSDVITSNSGNSVHLGDGNGTMTSLSMLRGASAYPVPID
IKIKCGTRVVVISGPNTGGKTASMKTLGVASLMSKAGMFLPAKNRPQIPWFDLVLADIGD
HQSLEQSLSTFSGHITRICNILEVASRESLVLIDEIGSGTDPSEGVALSTSILQYLKDCV
NLAVVTTHYADLSLLKEKDSQFENAAMEFSLETLQPTYQVLWGSTGNSNALSIAKSIGFD
LNIIERAQQWVEQLKPENQQERKGLLYQSLVEERNRLEAQARRAGSLHAEILDLYHEIQN
EAEDLGGRETALRVKETQQVQQELKTAKSQLDVVIQEFENGLRIASADQFNSLIKKSESE
IASIVEAHCPRDAYSVNDTDSKSYTPQIGEQVQVTGLGRKLATVVEAPEDDETVLVQHGQ
IKVRVKKSNIRSIASSERNTETRYAPRLRRQGQQSKKLQALPEPKKGEEVSYGPLVQTSK
NTVDLRGKRVEEASYHLEMAISASGPYSVLFVIHGMGTGAVKERALEILNNHPRIVKYEQ
ESPMNYGCTVAYIK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaccaatctcctattcacctccgtcgcccacaaagcccctccagttctcttc
cccaaagtgaaagcgctcaattccaactcgcccgagtcactcactctctcccagaccctc
caatccgaaaccctcgaaaccctagaatggccctcactctgcaaacaactctcatcgttc
acgtccaccaccatgggattctcggccgcgcagaaagccaagatccccttgggccaaacc
ccggaggagagccacaagcttctcgatcagacggcggcggcagcgtcggcgatgatggat
tctccaccattggatttctcgggaatcgaggacgtctcggggattttgaactcggctgtt
tcgcgcgagttgctctcgatttcggagctctgcgcgattcggcgaacgctccgagccgcg
aagctcttgttcgagaaggtgaaacagttggttaataccggagattgctctgaaactgaa
aggtacttgcctctgcttgaaatacttaagcactgcaatttccaagtggagttagagcat
aaaataggattttgcattgattgcaatttgttaataatccttgatagagctagtgaagat
ttggagatcattaggtcagaaaggaagaggaactcggaaagtttggattctttgttgaag
ggagtgtcatctcagatttttcaggctggggcaattgacagacctctcataaccaagcgt
cggtctagaatgtgtgttggtattagggcttcccaccgacatctacttccagatggtgta
atattaaatgttagtggttctggtgcaacatactttatggaacccaaagaagctatagag
ttgaacaacatggaagtgaagctttcaaactctgagaaagctgaggagatagcaattttg
agcttacttacatctgaaatagcggaatcagaaatagagataaggtatttgttggataga
attttagaagttgatcttgcttttgcaagggctgcctatgctcagtggatgaatggggtc
tgtccaattatcacttcacagggttgtgaggcaataaattttagtgaagaagaagattgt
gctctgtcagtagatattgatggtatacaacatcctctgctccttgaatcctctctgaga
agttcttcagatgtcatcacatccaactctggcaattcagttcacttgggtgatggaaat
ggcacaatgacttctttaagtatgttaagaggtgcatctgcttatcctgtgccaatagac
attaaaattaaatgtggaaccagggtggttgtgatatcagggccaaatacaggagggaaa
actgcttccatgaaaaccttaggtgtggcatctcttatgtcaaaggctggcatgttttta
cctgctaagaaccgcccacaaattccatggttcgatcttgttctagctgatattggagat
caccagtctttggaacaaagtctctcaacttttagtggtcacataacacggatctgtaac
atcttagaagtggcctcaagagaatcacttgtcctcattgatgaaattggtagtggaaca
gatccttcagaaggtgtggccctttccaccagcatcttgcagtatctcaaagactgtgtt
aacttggccgttgtgaccactcactatgcggatttgagtctcctgaaagaaaaggatagt
cagttcgagaatgcagccatggaattttcactagaaaccttacaacctacttatcaggtc
ctctggggaagcactgggaattcaaatgccttgagtattgctaaatcaattggttttgat
ctaaatataattgaacgtgcacaacaatgggtggaacaattaaagcctgaaaatcagcaa
gagcggaaaggtttgttatatcaatcactagtagaggaaagaaacagattagaagctcag
gccagaagagctggatctcttcacgcagaaattttggatctgtatcatgagatccaaaat
gaagcagaggatcttggtgggcgtgagacagctcttagggtgaaggaaacccaacaggtc
cagcaagaattaaagactgcaaaatctcagctggatgttgtgatacaggagtttgaaaat
ggactcagaattgccagtgctgatcagtttaattcactgatcaagaaatcagaatcagaa
attgcctctatagttgaagctcactgtcctcgtgatgcttattctgtcaatgatacagat
tccaaatcttatacacctcaaattggagagcaagtccaggtgacgggattgggacgtaag
ttagctactgtggttgaagcacctgaagatgatgaaactgtcctagtacaacatggtcaa
ataaaggtccgcgtaaagaaaagcaacatcagatctattgcaagtagcgaaaggaatact
gaaactagatatgccccacgtttgagaaggcagggtcagcagagcaaaaagctccaggct
cttccagagccaaaaaagggcgaggaggtttcatatggcccattggtgcagacatcaaag
aacacagtggatttacgtggtaaacgagtggaagaagcttcgtaccacctcgaaatggcc
atctctgcaagtggaccatattcggttctatttgtcatacatgggatgggcactggggct
gttaaggagcgtgcacttgagatattaaacaatcatccacgtatagtcaagtatgaacaa
gaaagtccaatgaattatggatgtacagttgcttatattaagtga
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