Quercus lobata (valley oak): 115991484
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Entry
115991484 CDS
T07350
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115991484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115991484
03036 Chromosome and associated proteins [BR:
qlo03036
]
115991484
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115991484
Coactivators
SAGA/TFTC/STAGA complex
115991484
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115991484
STAGA complex
115991484
TFTC complex
115991484
SAGA complex
115991484
SLIK complex
115991484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
115991484
NCBI-ProteinID:
XP_030971078
UniProt:
A0A7N2LMS9
LinkDB
All DBs
Position
5:complement(7801821..7811439)
Genome browser
AA seq
642 aa
AA seq
DB search
MAETSVSSPKPLQPSNPIDPSSATPPTQSQTPTQTQATLTNMATPSNSTQNPPPIPSPSP
LSHSPSLDHISSPPQIPQQQQQQQQQAVGLDYQQKQQLLQQQQSQTLSQNVTGLSNYQLQ
TIQRSTSMSRLNQLTQLQQQQQQQYGVLRQQQQQQQGLYGNVNFGGSAGIQQQSQQGQQT
QQQQQQQQQTQQQLGTNAGNLSRSALIGQNSHLPLLSGAAAAAAQYNLNPQLLASPRQKA
GLVQGSQFHQGNSPGQALQGMQALGMMGQINLSSQIRPNGNLAYAQRINQSQMRQQLQQQ
SSLNSPQVQSLPRGSSLFLSPHLSGLAQNGQPAMMQNTLPQQQWLKQMPSISSSGSFRLQ
HQRQQQVLMQQQLASSPQLLPNSMTLNQQQLSQLVQQQQQQQQQPMGHPQLPQQQQQQQQ
QQQPQQLQQPAQLPLHQQQQQSPRMPGLAGQKSLSLTGSQPDATASGTTTPGGSSSQGTE
ATNQLLGKRKIQDLVSQVDPQGKVDPELEDILLEISDDFIDNVTAFACSLAKHRKSPNIE
SKDLLLHLEKNWNLNVPGYSSEERKCRSKPLSSDLHKKRIDYIRSLMGSQHSETNMSNPK
EIIRQGLGNPVGVNHHVRPSLSSEQLVSQSTSPQMLQQMTRF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacttctgtttcatccccaaaacctctccaaccttcaaaccccatagaccca
tcttcagcaacaccaccaacacagtcacaaacaccaacacaaacacaagcaacactcaca
aatatggcaaccccatcaaattccacacaaaacccacctcccattccttctccttctcct
ctttctcactctccttctcttgatcacatctcgtctccaccacaaatccctcaacaacag
cagcagcagcaacaacaagctgttggtttagattaccaacaaaagcaacaacttttacag
caacagcaatctcaaacgttgtctcaaaatgtcactggtttatcaaactaccaactccaa
accattcaacgctctacatccatgtcaagattgaaccaattgacccaacttcaacaacaa
caacaacaacaatatggagtcttgaggcaacagcaacagcagcagcagggtctttatggg
aatgtgaattttggtgggtctgctgggattcaacagcaaagccagcagggccagcagaca
cagcaacaacagcagcagcagcaacagactcagcagcaattgggtactaatgctgggaac
ttgtcaaggtcagctctgataggccagaatagccatctgcccttgttgtccggggctgct
gcagcggccgcgcagtataacttgaatccgcaattgttagcctcgccaaggcagaaagct
gggttggtccaagggtctcaattccatcaaggtaattcacctgggcaagctttacaagga
atgcaagcactagggatgatggggcaaatcaatttgagctcgcaaataagacccaatggg
aaccttgcttatgcccagcgaattaaccagagccaaatgaggcaacaattgcaacaacaa
agttctctaaactctccacaggttcaaagcttaccaagggggtcgtcactatttttgagt
cctcacttatctgggttggctcagaatggacagccagctatgatgcagaacactttacca
cagcaacagtggttgaagcaaatgccatcaatctctagttctggctcattccgacttcaa
catcagaggcagcaacaagtcctcatgcagcagcaactggcttcatctcctcagttgctc
ccaaattctatgaccctaaaccagcagcaattatctcagctagtacagcagcagcagcag
cagcagcagcaaccaatggggcatccacagctgccgcagcagcagcaacaacaacaacag
caacagcagccacagcaactacaacaacctgcacaactgcctttacatcagcagcaacag
caatctcctaggatgcctggtctggcaggccagaaatcccttagtttgacaggatcacag
ccagatgctactgcatctggtacaactacaccaggggggagttccagtcaaggaacagaa
gcaactaatcaacttcttgggaagagaaagatacaggatttggtttcacaggtagatcca
cagggaaaggtggatcctgaacttgaagatattcttttagagatttctgatgacttcatc
gataatgtgactgcatttgcgtgcagtttggcaaaacatcggaagtctccaaatatagag
tccaaggatttattgcttcatctagagaaaaattggaatttgaacgttccaggatattca
agtgaagagcggaagtgccgaagcaaacctttatcaagtgatctccacaagaagcgtatt
gattatatacgatcactgatgggatcccaacactctgaaacaaatatgagtaatcctaaa
gagattataagacagggacttggtaacccagttggtgtcaaccaccatgtgcgaccttcc
ttgagttcggagcagttggtttcccaatcaaccagtccccaaatgctacagcagatgaca
cggttttaa
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integrated database retrieval system
