Quercus lobata (valley oak): 115991485
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Entry
115991485 CDS
T07350
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115991485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115991485
04121 Ubiquitin system [BR:
qlo04121
]
115991485
03029 Mitochondrial biogenesis [BR:
qlo03029
]
115991485
Membrane trafficking [BR:
qlo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
115991485
Atg8 conjugation proteins
115991485
Ubiquitin system [BR:
qlo04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
115991485
Mitochondrial biogenesis [BR:
qlo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115991485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
115991485
NCBI-ProteinID:
XP_030971079
LinkDB
All DBs
Position
5:complement(46530214..46539758)
Genome browser
AA seq
692 aa
AA seq
DB search
MASESIVVFAQFQSAVDEGFWHRFSSLKLNKLGIDDSPIPVTGFYAPCSHPQVSNHLTLL
AESLPSESNEQSSTAATSGGNRNRCPVPGILYNTNTIESFHALDKKSLLKAEAKKIWDDI
HTGKAVEDSAVLSRFLLISFADLKKWTFHYWFAFPALVLDPPATLVDLRRASQYFSLEEA
KSVSAVCNEWRKSSLTADVPFFLVCIDPNSLATVKHIKDWETCQSDGNKLLFGFYDPCHL
PNNPGWPLRNFLALISVRWNLKSVRFLCYRENRGFADLELSLVGEALITVPQGRAAKTGN
GLGWRDHQCLPNAVGWEQNKGRQVSRCICLAKSMDPTRLAVSAADLNLKLMRWRALPSLN
LNALSSMKCLLLGAGTLGCQVARMLMAWGVRKITLVDNGRVAMSNPLRQSLYTLDDCLNG
GEYKATAAVKSLGRIFPAVDAEGVVMAIPMPGHPVPSQEEDNVLEDCRRLHDLVDSHDAV
FLLTDTRESRWLPTLLCANTNKITITAALGFDSFLVMRHGAGPFSSNDERQRLGCYFCND
VVAPIDSTANRTLDQQCTVTRPGLAPIASALAVELLVGILHHPQGIFADGELANSSNSGS
SEQPLGVLPHQIRGSLSQFSQMTLVGHSSNSCTACSSTVVSEYRERGMEFTIQAINHPTY
LEDLTGLTELMKSASSFKLDWDDDDDDDCIEI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaatccatagtggtgttcgcgcaattccaaagcgcggttgacgagggtttc
tggcaccgcttttcttctctcaaactcaacaagctcggcatcgacgactctcccattccc
gtcactggtttttatgctccttgctcacatcctcaagtatcaaatcatttaactctacta
gctgagtctttgccttctgaatcgaatgagcaatcttcaacagctgccacaagtggtggc
aacagaaacaggtgccctgtcccaggcattctttacaacacgaatacaatagaaagtttc
catgcccttgataagaagagtttgctaaaggcagaagcaaaaaagatttgggatgacatt
catactggaaaagctgtggaggatagtgccgtactttcaaggttccttcttatctcattt
gcagacttgaaaaaatggacgtttcactactggtttgctttccctgctctggtgcttgat
cctccagcaaccttggttgatttaaggcgagcttcacagtattttagcttagaagaggca
aaatctgtttcagcggtttgtaatgagtggcgaaagtcaagcttaacagccgatgtgccc
ttctttttggtctgtattgatccaaattcactagctacggttaagcatataaaggattgg
gaaacctgccaaagtgatggtaacaagttgctgttcggtttttatgacccatgtcatctt
ccaaataatcctggttggcctcttcgcaactttcttgcacttatttctgtgagatggaat
ctcaagtcagttcgcttcttgtgctatagagagaatcgtggtttcgcagatttggagttg
tcccttgttggtgaagccttgattacagttccacaaggtagagcggcaaaaactggtaat
ggtttaggatggagggatcatcaatgtttaccaaacgcagtggggtgggaacaaaacaaa
gggaggcaagtctctaggtgtatttgccttgctaaatccatggatccaactaggttggcc
gtatctgcagcagatttgaacttaaaactaatgagatggcgtgctttgccatctctgaat
ttaaatgccttgtcatctatgaagtgtcttctactaggagcaggtacacttggatgtcag
gttgctcgcatgcttatggcttggggtgtccggaaaattacactggttgacaatggccgg
gttgctatgtcgaatccattgaggcagtccctatatacattggatgactgcctcaatggt
ggggaatataaagctacagcagcagtcaaaagtctcggtcggatatttccagctgtggat
gcagaaggtgttgtgatggctataccaatgcctgggcatcctgtgcctagccaagaagag
gataatgtgcttgaagattgtaggcgcctgcatgatttggttgattctcatgatgctgtt
ttcttgttgactgatacaagggaaagccggtggctaccaacacttctttgtgccaatact
aacaagattaccataactgcagctctaggatttgatagcttcttggtaatgcgccatgga
gctggtccttttagctctaatgatgaaaggcagagattgggctgttacttctgcaatgat
gtggttgcaccaattgattcaactgccaaccgcactttagaccagcaatgcacagttaca
cgaccaggacttgctccaattgcttcggccctcgctgttgaacttttggtgggcatcctg
catcaccctcaggggatatttgctgatggtgagcttgcaaactccagtaatagtggaagc
agtgagcagcctcttggtgttttaccccaccaaattcgaggttccctctctcaattttct
cagatgacacttgtgggtcactcctcaaacagttgcacagcttgttccagcacagtggta
tcagaatatcgagaaagaggaatggaatttaccatccaagcaatcaatcatcctacctat
ctagaggatctcactggactaactgagttgatgaaatcagccagctcctttaaacttgac
tgggatgatgatgatgatgacgattgtattgaaatttga
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