KEGG   Quercus lobata (valley oak): 115991678
Entry
115991678         CDS       T07350                                 
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115991678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qlo03041]
    115991678
Spliceosome [BR:qlo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115991678
 Complex B
    115991678
 Complex C
   U2 SnRNP specific factors
    115991678
SSDB
Motif
Pfam: DUF382 PSP RNase_HII REV
Other DBs
NCBI-GeneID: 115991678
NCBI-ProteinID: XP_030971378
UniProt: A0A7N2R4T9
LinkDB
Position
5:complement(39254241..39261214)
AA seq 568 aa
MAAETLLLSNGAVANGDLSSNPNPNPTKKSRDTERRRRRRKQKKNSMASQAPSSDADSND
PQQTFPQVEVEYVPEPAELDDGMDEEFRKIFSKFSFRETTATQDNDNKDESAENAASTKK
ADSDSEEEEQDNPQKEKGVSNKKKKLQRRMKIAELKQICSRPDVVEVWDATSADPKLLVF
LKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK
QKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYHEGKEFEVKLREMKPGMLS
QELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPV
DEFGRPLYGDVFGVQQQEQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEELIEEEDLEAG
IQSVDSLSSTPTGVETPDVIDLRKQQRKDTERPLYQVLEEKEEKIAPGTLLGTTHTYVVN
SGTQDKATAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKQRSQREDFS
DMVAENEKKRKRKMQEKEGKSKKKDFKF
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctgcggaaactctactactctccaacggcgccgtcgccaatggagatctgtcctct
aaccctaaccctaaccccaccaagaagtcccgcgataccgaacgacgtcgtcgtcgccgt
aagcagaagaagaactccatggcctcccaagccccctcgagcgacgctgattccaacgat
cctcaacagacatttccgcaagttgaagtggagtatgtcccagagcctgctgagcttgat
gatggaatggatgaagaatttagaaagatttttagcaaattcagtttccgtgaaactact
gctactcaggataatgataataaggatgagtctgccgaaaatgcagcctcaaccaagaag
gccgactcagactcagaagaggaagaacaggataacccacaaaaagagaaaggcgtgtca
aacaagaagaagaagctacaacggcggatgaagattgctgaactgaagcaaatttgctca
aggcctgatgttgttgaggtgtgggatgcaacctctgcagacccaaagttgttggtgttt
ttgaaatcatacaggaacactgtgcctgtcccaaggcattggtgtcagaaacgtaaattt
ttgcagggcaagcgtggtattgagaaacagccatttcagcttcctgattttattgcggca
acaggaattgagaaaatcagacaggcttacattgaaaaagaggacagtaagaagttgaag
cagaagcaacgagagcggatgcagccaaagatgggaaaaatggatattgactatcaggtt
ctccatgatgcattctttaaataccaaacaaaaccaaagcttacaactcttggagatttg
taccatgaaggcaaagagtttgaggtgaagttaagggaaatgaagccaggcatgctgtcg
caagaactaaaagaagcccttggaatgccagagggtgctcctcccccgtggctcatcaat
atgcagagatatggtcctccaccatcctacccacatctgaaaattcctgggcttaatgct
cctatcccgcttggagctagctttggttaccatcctggtggctggggcaagcctcctgtt
gatgaatttggacgtcctttgtatggagatgtattcggtgttcagcaacaagaacagccc
aattatgaggaagaaccagttgataagaccaagcattggggtgatttggaggaagaggaa
gaggaagaagaggaagaggaagaggaagaactgattgaggaagaggacttagaggctggc
attcaatctgtagatagtctctcaagcactcctactggtgttgagacacctgatgttatc
gatcttcgaaagcagcagagaaaggacactgagcggccactttaccaagtacttgaagaa
aaagaagagaaaattgcccctggtactttgcttggaacaacacacacatatgtggttaac
tctggcacccaagacaaggcaactgccaaaagggttgatcttcttagaggtcagaaatca
gataaggtggatgtaactctacaaccagaagagttggaagccatggagaatgttttgccg
gctaagtatgaggaagcaagggaggaagagaagcagcggagtcagcgggaggatttcagt
gacatggttgcagagaatgagaagaaaaggaagcggaagatgcaagaaaaggaaggtaag
tcgaagaagaaggatttcaagttctag

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