Quercus lobata (valley oak): 115991795
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Entry
115991795 CDS
T07350
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115991795
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
115991795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
115991795
NCBI-ProteinID:
XP_030971579
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Position
5:complement(14732630..14759867)
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AA seq
652 aa
AA seq
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MALFLSCANGNHRPTSSYANGLVCCDICGKVLHEDLYTDEPSFVKGAGGESKLSGSVVRS
IQSGYSESFRRTLDKGRDMIESIVTTFNISGGDSIVNPACAFYQIAVERNFTRGRKTDQV
AAACLYIACRVAKDPKPFLLIDFSEYLSINVYVLGAVFLQLCQLLSLGEHPTIIKPVDPS
LYISRFTEKLLKQRNMKVSQTALYLIARMKRDWMQTGRKPSGLCGAALYISALSHGYSFS
KTDIVKIVHICEMTLTKRLIEFENTDSGSLTIEELTKNAVELKESVPSVGVSQKSGEVLC
EHKNSGAPHFAHGLCRTCYDAFVKLSGGLHGGSEPPAFQRAEKERIAMESTNNADESTVP
QQESENIEQVEKVKSFTENSQKAIENEQLNQRDFTESSQKENENEQLNQRENGSNSAATG
DQIEVDGVSDKFQKSKEASSITDDESDGLSDIDDVEVDGYLNNDEETRYKTIIWEEMNKE
YLEEQAAAAAAKMEASQVDLENCSDELRAAHEFAAAAAAAVAKSRKERKRTQDSNANPAQ
TAAEAAHQMLIKKRLSSKINYDVLETLFTNDPPSDSNKKAKASNDDGDGDATGQSDGEKE
HDGDITDNYDEPGQGFEDMEQEDDTGIYSNGLHYENGEDFDDYNYDNGNDEY
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctctattcttgagttgtgctaacggtaaccatcggcctacttcgtcttatgccaat
ggcttggtgtgttgtgacatttgtgggaaagttctccatgaagatttgtacactgacgaa
ccttcgtttgttaagggtgcgggaggagagagcaaattgtcaggtagcgtggtaagatcc
attcaaagtggctattcagaatcatttaggaggactttagataaagggagagatatgata
gaaagtatcgttacaacatttaatataagtggtggtgactctatagttaatccagcctgt
gcattttatcagatagctgttgaacggaattttactagggggcgtaaaacagatcaagtt
gcagctgcttgcctttatattgcatgtcgtgtagctaaagacccaaaaccatttcttctt
atcgatttttccgagtatttgtccataaatgtttatgtgctaggtgctgtatttttgcag
ctgtgccaacttctaagccttggagagcatcctaccattataaaacctgttgatccttcc
ctttatatttctagatttacagaaaaattattaaagcaaagaaatatgaaggtgtctcaa
actgcattataccttattgccagaatgaaaagagactggatgcagactggcagaaaacct
agtgggctctgtggtgcagcattatatatctctgctctttcacatgggtacagcttttcg
aagactgacattgtaaaaattgtacatatttgtgaaatgacgttgacaaaacgattgatt
gaatttgagaatacagattcggggagcttgacgattgaggagttaaccaagaatgctgta
gagcttaaggagagcgtaccatcagttggtgtgtcccaaaagtcgggggaagtgctttgt
gaacataaaaatagtggggcacctcattttgcccatggactttgtagaacttgctatgac
gcttttgttaaactttccgggggactacatggtgggtcagaacctcctgctttccagcgt
gctgaaaaagagagaatagccatggaatctactaataatgcagatgaatcaactgtgcct
cagcaagagagtgaaaacattgaacaggttgagaaagtcaagtccttcactgaaaacagt
caaaaggcaattgagaatgaacaattgaaccaaagggatttcactgaaagcagccaaaag
gaaaatgagaatgaacaattgaaccaaagggagaatggaagtaattcagctgccactgga
gatcagattgaagtagatggtgtttctgataaatttcagaaatctaaggaagcgagttcc
atcacagatgatgaatcagatggtctttctgatattgatgatgttgaggttgatggctac
ctgaataatgatgaggagacacgttataagacaattatatgggaagaaatgaacaaagag
tatcttgaggaacaagcagcagcagctgctgctaagatggaagctagtcaggtagactta
gagaattgttctgatgaattacgagctgcgcatgaatttgctgcagcagctgcagcagct
gtggccaagtcaagaaaggagcgaaaacgaacacaagattcgaatgccaatcctgctcaa
acagctgcagaagcagctcatcaaatgctaatcaagaagagactcagttcgaaaatcaac
tatgatgtgttggagacactcttcaccaacgatccaccatctgattcaaataaaaaagcc
aaagcatcaaatgatgatggtgatggtgatgccacagggcaaagtgacggtgagaaagag
catgatggggacatcacagacaactatgatgaaccgggacaagggtttgaagacatggag
caggaagatgacacgggaatatatagcaatggattgcactatgaaaatggagaggatttt
gatgactataactatgataatggtaacgatgaatattga
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