Quercus lobata (valley oak): 115991849
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Entry
115991849 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115991849
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115991849
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115991849
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_RanBP
Spt4
POT1
Motif
Other DBs
NCBI-GeneID:
115991849
NCBI-ProteinID:
XP_030971655
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Position
5:complement(72833921..72836297)
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AA seq
462 aa
AA seq
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MAIPKLIISAPFTFTSLLLHHKPINPRKTSPLFSFLTMSSSSSSSWTCKKCTFINPTSQN
QKSTCEICLTPFSSSSSSSSPPPSPSAPKWSCKACTFLNPYKSGSCEVCGTRASVSSLSS
FEDLKEIDVDDEGLDSGVGSVFLPLQRCNKRKAGDPVVVDEDSAEFGGFRGIKASNKAEA
VLEETGQGTVPSSLKILSYNVWFREDLEMHKRMKALGDLIQLHSPELICFQEVTPNIYDI
FCHSSWWKVYHCSVSTEMANSRPYFCMLLSKLPVKSFKCKPFTNSIMGRELSVAEVEVQR
GKTFVVATSHLESPCPAPPKWDQMYSKERVEQAKEAINFLKKNPNVVYGGDMNWDDKLDG
QFPFPDGWVDAWQELRPGENGWTYDTKSNQMLSGNRTLQKRLDRFICNLRDFKISGIDMI
GMDAIPGLSYSKEKKVRKEVKKLELPVLPSDHYGLLLTISSL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcccaaagcttataatcagtgccccattcacattcacttctcttcttctacat
cacaaaccaataaaccctagaaaaacctctcctctcttttcatttctaacaatgtcgtct
tcgtcttcttcttcttggacctgcaaaaagtgcactttcatcaaccccacttctcaaaat
caaaaatccacttgcgaaatctgcttaactcctttttcttcttcatcatcatcatcatcg
ccacctccttctccttcagcccctaaatggtcatgcaaggcctgcactttcttgaaccct
tacaagagcggaagctgtgaggtctgtggcacgagggcctctgtgtcttccttgtccagc
tttgaggatttgaaagaaattgatgttgatgatgagggtttggattctggggtggggtca
gttttcttgcccctgcagcgttgcaacaagaggaaggcgggggacccagttgtggttgat
gaagattctgctgaatttggtgggtttagagggatcaaggcttccaataaggccgaggct
gtgctggaggaaactggtcaaggaaccgtacctagttcattgaagattttgagctataat
gtttggtttcgagaagatctggaaatgcataagaggatgaaagcccttggtgaccttatc
caactgcattccccagaactcatctgttttcaggaggttacacctaatatatatgatatt
ttctgccattccagctggtggaaggtatatcattgctcagtttcaactgagatggcgaac
tcaagaccttacttttgcatgctgttaagcaaactgcccgtgaaatccttcaaatgtaaa
ccctttaccaattctataatggggagagaactatctgttgctgaggttgaagtccagagg
ggcaagacttttgttgttgctactagccatcttgagagtccctgcccagcacccccgaaa
tgggatcagatgtacagcaaggaacgtgtagagcaggcaaaggaggcaatcaactttctt
aaaaagaatccaaatgtggtttatggcggtgacatgaattgggatgacaagttagatggt
cagtttccttttcctgatggatgggtcgatgcatggcaagagttaaggccaggggaaaat
ggatggacatatgataccaagtccaaccagatgttgtctggtaaccgtacattacaaaaa
cggctagatcgatttatttgtaatctgcgtgatttcaagatcagtggaattgacatgatt
gggatggatgcaataccaggtctgtcatatagcaaggagaagaaagtgaggaaggaggtc
aagaagctggagcttcccgttcttcctagtgatcattatggcttgcttttgacaatctct
agcctgtaa
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