Quercus lobata (valley oak): 115992188
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Entry
115992188 CDS
T07350
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115992188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115992188
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115992188
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115992188
NCBI-ProteinID:
XP_030972136
UniProt:
A0A7N2R4G3
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Position
5:20527418..20533032
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AA seq
330 aa
AA seq
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MSTTVQRTPRSGRQSLFFQDLASPVSARRGKFSSPGQAAAVSALWRENFAGSDLPPPPVF
TLEDRSDFSPESGIPDYPLSPEAKSDPRTPVQSSGRDISTRGKNKSEASTSYALMGAQQN
QQGSVGLNWWSPAKSGSEQEDKGKSSPVEGVVQPGALITLPPPREVARPEVQRNCLPTGD
LNEEEWVTVYGFSPSDTNLVLREFEKCGVILKHVPGPREANWMHILYQNRFDAQKALSKN
GMQINGVLIVGVKPLDPMQRQALSERVNNQGFMTLPPQPSTKSSELNTLKAPSRPYYLQN
GSTNTRQSGGAIASPTKSLVSKIMDLMFGV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacagtacagagaactcccagatctgggaggcagtcgttgttttttcaagat
ttggcatctccagtttctgcccggagagggaagttttcaagtccaggtcaggcagcagca
gtatctgctctgtggcgtgagaattttgcagggtcggatcttccacctcctcctgttttc
accttggaagaccggtcagatttttctcctgaatctgggattccagattacccattatct
ccagaagccaaatcagaccccagaactcctgtccagagttccggtcgggacatctcaact
cgagggaaaaacaaatcagaggcaagcacttcttatgccctgatgggtgcacagcaaaac
caacagggttcagtgggtttgaattggtggtcacctgcaaagagtggcagtgagcaagaa
gataaaggtaagagttcgcctgttgagggtgtggttcagcctggtgctttgatcacactt
ccacccccaagggaagttgcaagaccggaggtacagaggaattgcttgcccacaggtgac
ctcaatgaggaagaatgggttactgtctatgggttttccccatctgacacgaatttagtt
ttgagggagtttgaaaagtgtggtgtgattttgaaacatgttccaggtccaagagaagct
aactggatgcacattctatatcagaatcgatttgatgctcagaaggctctcagcaagaat
ggcatgcaaatcaatggggtactaattgtaggtgttaagccattggatccaatgcaacgc
caggctttgagtgaaagggtcaacaatcagggattcatgactttacctcctcaaccgtcc
acaaaatcctcagaactgaacacattgaaagccccctctcgcccctattatcttcaaaat
ggcagtaccaatactcggcagtcaggaggtgccattgcttccccaacaaaatctttggtg
tctaaaatcatggatctgatgtttggagtttag
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