KEGG   Quercus lobata (valley oak): 115992332
Entry
115992332         CDS       T07350                                 
Name
(RefSeq) uncharacterized protein LOC115992332 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115992332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qlo03036]
    115992332
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115992332
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    115992332
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     115992332
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 115992332
NCBI-ProteinID: XP_030972352
UniProt: A0A7N2KR48
LinkDB
Position
1:complement(53767707..53773163)
AA seq 740 aa
MSLETEETAMASLGMKKRKKYWSQSQSPSPMIMTTSAVSSLDSSASQLHTHENVYSSRKI
IINNKLDVPNNKSVQVEEESFIIEKRKSNNRARPRRGGKNRVVVLSPYFANQQPTTRIIN
KSDEIDLGFDGNAKGRRKDSRRYTQQGLEDEDHKMESDYQIASPLEDGSLQNEILKLEDL
LSQCTYKTKDGQYDDVDGGRNLAAEVENEAVMLPSIFANLKEDQLQQPGLQIGKLSHSKR
RRRNEKQQAIARVDIRKVSPYFANEGPKVEETIPNKNTVISKHSRGDGDPRKDKKRGKRK
DDRISKECTKSNEILGFEKAVLIDEDVGLTEVFDGNAKGRRKDSRHYMRDFHKMVVKDEE
REMADEEQKMELDYKIKRRTSPFEGSLQNEDLKLEDVLSQYTYRSHDMTENGKNGQHDEE
QEKKCSEKLSFPFEMTNNSSVLPDDGSRNLAGKVENEAVILPSIHTNLKEEQVPQNGLEI
GKVSHSKRRRRNERQQAIAHVEIRKVSPYFWRSTGQVVRNDGDGTKKMKPPRRCATTHAT
SVRVSPYFQKISKEEENEDGRLLEGSNGYKKPVAIRTVLSSSEKLDDAYRRKSPDNMWKP
PRTTPGLLQERHAHDPWRVLVICMLLNRTSGFQARRVISNLFTLCPDANTATEVAKEEIE
KIIKTLGLQKKRASMIQRLSREYMGESWTHVTQLHGVGKYAADAYAIFCTGTWDQVRPND
HMLNHYWKFLKDRERKIGLI
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgtcgttggaaacagaagaaacggcgatggcgtcgttgggtatgaagaaaaggaaaaag
tattggtctcagtctcagtctccgtctccgatgatcatgacaacctccgccgtaagttct
ctcgattcctctgcatctcaattacatactcatgagaatgtttattcttctaggaaaatc
atcatcaacaataaacttgatgttccaaataataagagtgtacaagtagaagaagagtcc
tttattattgagaaaagaaaatcgaataatagagctagacctagacgaggaggtaagaat
agggttgtggtgctttctccttattttgctaatcaacaacccaccaccagaatcatcaac
aagtcggatgagattgatttggggtttgatggtaatgccaaggggagacgaaaggatagt
cggcgttacacgcagcagggtttggaggatgaagatcataaaatggagtccgattaccaa
atagccagtccacttgaggatggaagtttacaaaatgagattttaaagcttgaagatctc
ctctcacaatgcacttacaagacaaaggatggccagtatgatgatgttgatggtggcagg
aacttagctgcggaggttgagaatgaggctgttatgttaccaagcatttttgctaacttg
aaagaagaccaattgcagcaacctgggttacaaattggaaagctttctcattccaagcgc
aggagaagaaatgaaaaacagcaagcaatagctcgtgttgatattcgaaaggtctcccct
tactttgcaaatgaaggacccaaggttgaggagaccattcccaacaaaaacactgtaata
tcaaagcatagtagaggtgatggtgacccaaggaaggataagaagagggggaagagaaag
gatgatagaattagcaaggagtgtaccaagtctaatgagatactggggtttgagaaagcc
gttttaatagatgaggatgtaggtttaactgaagtttttgatggtaatgccaaggggaga
agaaaggatagcaggcattacatgcgggattttcacaaaatggtagttaaagatgaggag
agggagatggcggatgaagagcaaaaaatggagttagattacaaaataaaacgtaggact
agtccatttgagggaagtttacaaaatgaggatttgaagcttgaggatgttctgtcacaa
tacacttacaggagtcatgatatgacagagaacggaaagaacggccagcatgatgaggag
caagagaagaaatgtagcgagaaacttagtttcccatttgagatgacaaacaattcatcc
gttctacctgatgatggtagcaggaacttggctgggaaggttgagaatgaggctgttata
ttgccaagcattcatacaaacttgaaagaagagcaagtgccgcaaaatgggttagaaatc
ggaaaggtttctcattccaagaggaggagaagaaatgaaagacagcaagcaatagctcat
gttgaaattcgaaaggtctccccttacttctggaggtcaacgggacaggtggtaagaaat
gatggtgatggtacaaaaaaaatgaaaccaccaagacgttgtgcaacaactcatgctact
tctgtgagggtctcaccctacttccaaaagatatccaaagaagaagaaaatgaagatggc
cgtttgttggaaggtagcaatggatataaaaaacctgttgcaattaggactgttctttct
tcttctgagaagctagatgatgcataccgaagaaaaagtccagataacatgtggaagcct
ccgcgcaccacacctggtctactccaagagcgtcatgcccatgatccttggagggtattg
gtgatatgtatgctcctaaatcggacatctggttttcaggctagaagggttatatcgaat
ctctttactctttgtcctgatgcaaatacagcaactgaggttgccaaagaggaaatagaa
aagattataaaaactctaggtctacaaaagaagagggcttcgatgatacaacgcttgtct
cgggagtatatgggggaaagctggacccatgtgactcagctgcatggtgttggcaagtat
gcagctgatgcatacgcaatattttgtacaggaacgtgggaccaggtaaggcctaatgat
catatgctaaatcattactggaaatttctcaaagatagagagagaaagataggactgatc
tga

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