Quercus lobata (valley oak): 115992918
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Entry
115992918 CDS
T07350
Name
(RefSeq) nuclear transcription factor Y subunit B-1
KO
K08065
nuclear transcription Y subunit beta
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115992918
Transcription factors [BR:
qlo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
115992918
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Bromo_TP
PEPcase
CENP-T_C
TAF
Motif
Other DBs
NCBI-GeneID:
115992918
NCBI-ProteinID:
XP_030973025
UniProt:
A0A7N2LSM9
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Position
5:complement(67789100..67792706)
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AA seq
223 aa
AA seq
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MERGGFHGYRKIPNTNSGLKLTNISMRQLAEMNHTTITTATTTTDDNECTVREQDRFMPI
ANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWA
MSKLGFDDYIEPLTLYLHRYREMEGDRGSIRGEPLGKRGSGGSVDFGALGVAAFAPAFHM
GHHHGFFGAAMGGWNLKDAPNGNVAGPSAQAAVASGEPLGQYK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtggaggcttccatggctaccgcaagatccccaacacaaactctggcctgaag
ctaacaaacatcagcatgaggcagctagcagagatgaaccacaccaccatcaccaccgcc
acaaccaccacggatgacaacgaatgcacggtgagagaacaagacaggttcatgccgatc
gcgaacgtgataaggatcatgcgcaagatcctccctccacacgccaagatctctgatgat
gccaaagagaccatccaagaatgtgtgtccgagtacatcagcttcatcactggggaagcc
aacgagcgctgccagcgcgagcaacgcaagactatcactgccgaggatgtgctttgggcc
atgagcaagctcgggttcgatgactacattgagccactcacattgtacctccaccgctac
cgcgagatggaaggtgaccgtggctccattagaggtgaaccgctaggaaaaaggggtagc
ggtggcagtgttgattttggggcacttggggttgctgcatttgcaccagcttttcatatg
gggcatcaccatgggttttttggtgctgcaatgggtgggtggaacttgaaggatgcacct
aatggaaatgtggctggaccttccgctcaggctgctgtggccagtggtgaaccacttggg
cagtataagtga
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