KEGG   Quercus lobata (valley oak): 115993542
Entry
115993542         CDS       T07350                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115993542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qlo03036]
    115993542
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     115993542
    NSL complex
     115993542
   HMT complexes
    COMPASS/SET1 complex
     115993542
    COMPASS/SET1 complex (yeast)
     115993542
    MLL-HCF complex
     115993542
    MLL3/MLL4 complex
     115993542
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     115993542
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_Vps41 PROPPIN Beta-prop_VPS8 VPS8_N PALB2_WD40 Beta-prop_WDR11_1st Beta-prop_LRRK2 Beta-prop_IP5PC_F DUF5888 WDR54
Other DBs
NCBI-GeneID: 115993542
NCBI-ProteinID: XP_030973341
LinkDB
Position
6:37841675..37844359
AA seq 324 aa
MATETESEPTESFKPYTLAKTLTPHKRAISAVKFSSDGRLLASSSADKTLRISVVKSSSE
SSAPTVSLLQELEGHEQGVSDLAFSSDSKYLVSASDDKTLRLWDIETGSLIKTLSGHTNY
AFCVNFNPQSNMIVSGSFDETVRIWDVKSAKCLKVLPAHSDPVTAVDFNRDGSLIVSSSY
DGLCRIWDAATGHCMKTLIDDENPPVSYVKFSPNAKFLLVGTLDNTLRLWNYATGKFLKT
YTGHVNSKYCLSSTFSVTNGKYIVSGSEDSCLYLWELQSRKIVQKLEGHTDTVISVSCHP
TENMIASGALGNDKTVRIWTQEKD
NT seq 975 nt   +upstreamnt  +downstreamnt
atggcgacagagacagagtcagagccaaccgaatccttcaaaccctacactctcgccaaa
accctaactccccacaagcgagcaatctccgccgtcaaattctcatccgacggccgcctc
ctagcctcctcctccgccgacaaaaccctccgcatctccgtcgtcaagtcctcgtcggaa
tcctccgctcccacagtctctcttctccaagaactcgaaggccacgaacagggcgtttcg
gacctagccttctcctccgactccaaataccttgtctcggcctccgacgacaagaccctc
cgcctctgggacatcgaaactggctccctcatcaaaaccctgtcgggccacaccaactat
gctttctgtgtcaactttaatcctcagtccaacatgattgtctccggctcattcgatgaa
actgtccgaatctgggatgttaagtccgctaagtgtctcaaggtcttgccggctcactct
gaccccgtcaccgccgtcgattttaaccgcgatgggtcgctcattgtttcaagtagttac
gacgggttgtgtcgaatttgggacgctgcgactgggcattgtatgaagactttgattgac
gatgagaacccgcccgtttcgtatgttaagttctcgcccaatgccaagtttcttcttgtt
ggaacgcttgataatactttgaggctttggaactatgcgactgggaaatttttgaagact
tatactggccatgtaaattcgaagtactgcctttcatccacattttctgtaacaaatgga
aagtatattgttagtggttctgaagatagttgtctatacttgtgggagctgcagagcagg
aaaatagtccagaaattggaaggtcataccgacacggttatatcagtatcatgtcacccc
actgagaatatgattgcttctggtgcgcttggcaatgacaaaactgtgaggatttggacg
caggagaaggattaa

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