Quercus lobata (valley oak): 115993576
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Entry
115993576 CDS
T07350
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115993576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115993576
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115993576
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
115993576
NCBI-ProteinID:
XP_030973371
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All DBs
Position
6:15838932..15848730
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AA seq
257 aa
AA seq
DB search
MEEERHTCLKLVPQDSDPIFVKGSWFPSHFHLSITDGLHTWICHASQDDVRDRAALWDQP
VSDYVLLAERYLGFQQPGSVYRFTDAGDSNKRLSWTFEKEGTKLEWRWKCQPSPNSKETT
AGILDFLMDANIRLSEEVVRKTQSFEMLKVEAEKCLAQSERINKERVDFESEIYAKFLGV
LNSKKAKLRDLRDQISNKKAAGKLPEEEEEGSTDKTESFDDGSDNETSEEEPAEKVSGTS
KDILVSKPRGRKRIARI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagagacacacatgcctaaagctggtgccccaagacagcgacccaatcttc
gtgaagggcagctggttcccctcccatttccacctctccatcaccgacggcctccacacc
tggatctgccatgcctcccaagacgacgtccgagaccgagccgctctttgggaccaaccc
gtctccgactacgttctcttggccgagcgctacctagggtttcagcaacccggctctgtc
tatcgcttcaccgatgctggagactccaacaaaaggttgtcgtggacttttgagaaagaa
gggaccaagctagaatggcgatggaagtgtcagccgtcgcctaatagtaaggaaactaca
gcagggatattggactttctcatggatgcaaatataaggctaagtgaagaagttgtcaga
aaaactcaatcttttgagatgctgaaagtggaagctgagaagtgtttagcacagagtgag
agaattaacaaagagagggtggattttgaatctgaaatatatgcaaagtttcttggggtc
ttgaattcaaagaaagcaaaactaagagatcttcgagatcagatttcaaataaaaaggct
gctgggaaattgcctgaagaagaggaagaaggatccactgacaaaactgaaagttttgat
gatggaagtgacaatgagacaagtgaggaagaacctgcagaaaaagtttcaggcacttca
aaggatattctagtgagtaagcctcgtggccgaaagaggattgcacgcatttag
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