Quercus lobata (valley oak): 115993643
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Entry
115993643 CDS
T07350
Name
(RefSeq) serine--tRNA ligase-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115993643
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
qlo01007
]
115993643
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115993643
Enzymes [BR:
qlo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
115993643
Amino acid related enzymes [BR:
qlo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
115993643
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115993643
Prokaryotic type
115993643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
OVT1
YabA
Spc24
PI3K_P85_iSH2
ERM_helical
TMEM120A-B
Augmin_dgt2_C
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
115993643
NCBI-ProteinID:
XP_030973450
UniProt:
A0A7N2LUV3
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All DBs
Position
6:complement(3650872..3656998)
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AA seq
434 aa
AA seq
DB search
MLDHNLFREDRDDINNPNLVRESQRLRYADVDVVDQIIHLDKQRRQCQYELDNLRQEFNK
INREIARLKIAGEDATETIKNTKENKKLTAKKEAQFQEIKDELYRKLGTVGNLVHASVPI
SNDEANNAVIRCWGEKRMEPNLRNHVELMELTGIADTKKGGNVAGGRGYFLKGMGVLLNQ
ALINFGLSLLRRRGYTLMQTPSLMRKDVMIKCAQLSQFDEELYKVTGEGDEKYLIATSEQ
PLCSYHQGEWINPKQLPLRYAGWSSCFRKEAGSHGKDTLGIFRVHQFEKVEQFCITSPNG
NESWEMHEEMITNSEDFYQELKIPYQTVAVVSGALNNAAAKKYDLEGWFPASKRYRELVS
CSNCTDYQSRRLEIRYGLNKNDEQAKQYVHMLNSTLVATERTICCILENYQKDDGVEIPE
ALLPYMDGVTFLPF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccacaacctcttcagggaagacagggacgacatcaacaaccctaatcttgta
cgtgaatctcagcgccttcgatatgctgatgttgatgtcgttgatcaaatcattcacctt
gataaacaacgaagacaatgtcaatatgagcttgataatctgcgccaagagttcaataag
attaacagggaaattgcccgccttaaaatagcaggagaagatgcaactgaaacgataaag
aatacgaaagagaacaagaaattgacagcaaagaaagaagctcaatttcaggaaattaaa
gatgaattgtacagaaaattggggacagttggaaaccttgtccatgcctcggttccaatc
tccaatgatgaggcaaataatgctgtaattcggtgttggggggagaagcgaatggaacca
aatctaaggaaccatgttgagcttatggagttgactggaattgcagatactaaaaaaggt
ggtaatgtagctggaggcagaggttacttcttgaaaggaatgggagtacttctaaatcag
gctttaataaactttggtttgtcattgctaagaagaagaggttataccttaatgcagact
ccttccttaatgagaaaagatgttatgattaagtgcgctcaactatctcaatttgatgaa
gagctttacaaggtcactggtgagggagatgaaaagtatctgattgcaacatctgagcaa
ccattgtgttcttatcaccaaggtgaatggattaatcccaagcaattacccttaagatat
gcaggatggtcatcttgtttccgaaaagaagctggttcacatggtaaggatactctaggt
attttccgagttcatcaatttgagaaggtggagcaattttgcattaccagcccaaatggc
aatgagtcttgggaaatgcatgaggaaatgatcacaaattctgaggatttctaccaggag
ctaaagatcccctatcaaactgttgcagtggtttccggtgcattaaataatgcagccgca
aagaagtatgatttagaagggtggtttcctgcttccaaaagatatagagaacttgtgtcc
tgttcgaactgcactgactaccagtccaggagactagaaattcgttacgggttgaacaag
aatgatgaacaggcaaagcaatatgttcacatgttgaactctaccctcgtagcaaccgag
aggaccatttgttgcatccttgaaaattaccagaaggatgatggtgttgagatcccagaa
gctttactaccctatatggatggtgtcactttccttcctttctga
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