KEGG   Quercus lobata (valley oak): 115993802
Entry
115993802         CDS       T07350                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
qlo  Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115993802
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    115993802
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD ResIII Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-RING_4 U-box
Other DBs
NCBI-GeneID: 115993802
NCBI-ProteinID: XP_030973635
UniProt: A0A7N2LVV6
LinkDB
Position
6:complement(16657294..16664412)
AA seq 1160 aa
MEPKPMDDIDGTLQNPGLSAPPITVKRTVTSTGARITTQIKEDGSEDSEEVKPVKSLAGD
EVEDKVVVSENVCSDCLAGSVEGVKSSRTRFEEFIKANKKIVSEEECLKTESKEEPQVNR
VEEEPDVGFDDKKKPEDSDSDRPLVPEKSVEEEPDVGFEAKVPSVPEKSFKNMSYKERLQ
FWGHAMFSGEGTNAHEKKVKPEGLETARLANESKANVRVREEPRLFAENKVNVKEESVRS
SFWSKPQNVKKEKVEEQRVSAGLVEDGDFPEDPDWFLVGRTLVTALSTTKGRKLVDNEIV
NFTFPSPNSRYNMQWIVRFSTKRSGEIGRLPMEWAKCVVPLVCSNKVKVLGRCVAAPANL
SLMQEIMLYVSFYIHHSIFSDGVESSWRLDGCRSIDSTVYPLLTLFNLLKNKPFQKADFT
PAELDSRKRLLNLEGDSEEAASMLPIVKRRKGCQQFPEQNKDEQTITESSLNKLMGAVDV
YNLEEMEPPNTLLCDLRPYQKQALYWMSKLEQGIDVEKAAETLHPCWSAYRICDGRASSI
YVNVFSGEATTKFPTATQMARGGILADAMGLGKTVMTIALILARRGRGCPDNEELDTETA
DNAQITKKRKIDSHINISSKTKGGTLIVCPMALLGQWKDELETHSEPESISIFVHYGGDR
TNNPKVIAEHDVVLTTYGVLTAAYKSDAEDSIFHKVSWYRVVLDEAHTIKCWKTLGAQAA
CALSSCCRWCLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWNKLIQKPYENGDPRAMKLI
KAILRPLMLRRTKETKDKEGRPILVLPPTDIQIIECEQSEAEHDFYDALFRKSKVQFDQF
VAQGKVLHNFANILELLLRLRQCCNHPFLVMSRADSQKYTDLNKLAKRFLETNTDSGTNQ
TVPTRAYIEEVVEGIRKGENMECPICMEFADDPVLTPCAHRMCRECLLSSWRTPTSGLCP
ICRQLLKKTELITCPTENQFRVDVENNWKESSKVSKLLDCLEQICESGSGEKSIVFSQWT
SFLDLLEIPLKRRGVGFLRFDGKLVQKQRERVLKEFSETKDKMVLLMSLKAGGVGLNLTA
ASHVFLMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVRDTVEERMQQVQARKQRMIAG
ALTEEEVRTARIEELKMLFR
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggagcctaaacccatggatgacattgatggtacactccaaaaccccgggttatcggcc
ccacccattaccgtgaagcgtaccgttactagtaccggcgctcggatcacaacccagatc
aaagaagacggctccgaggactcagaagaagtcaaaccggtgaaaagtctggcaggggat
gaagttgaggacaaggttgttgtgagtgaaaatgtttgctcagattgtcttgctggctca
gtagaaggcgttaagtcctccagaacaaggttcgaggagtttattaaggcaaataagaaa
atcgtgtctgaagaggagtgtctcaaaaccgagagtaaagaagaaccgcaagtaaacagg
gtcgaggaggagcctgatgttggttttgacgataaaaagaaacccgaggattcggatagt
gatcggccattagtacctgaaaagagtgttgaggaggagcctgatgtgggttttgaggct
aaggttccatcggtacccgaaaagagtttcaaaaacatgtcttataaagagcggctacag
ttctggggtcatgccatgttcagcggtgaaggtaccaatgcacatgagaaaaaggtgaag
cctgaaggattggagactgcccgtttggctaatgagtctaaggctaatgttagagtgaga
gaagagcctcgattgtttgctgagaataaggtcaatgtgaaagaggaatcagtccgttct
agcttctggtcgaaaccgcaaaatgtgaagaaggaaaaggttgaagaacaaagggttagt
gctggtttggtggaggatggggattttccagaggatcctgattggtttctggtgggaagg
acgttagtcactgcgctttcgaccactaaaggaaggaaattggtggacaatgagatcgtt
aatttcacttttccttctccaaattccagatataatatgcagtggattgttcgcttctca
accaaacggtccggagagattggtcggcttccaatggagtgggcaaaatgtgttgttcca
cttgtgtgttctaataaggttaaagtacttggacgatgtgtagctgcaccagcaaacctt
tctttgatgcaagaaataatgttgtatgtaagcttttatattcatcattccatattctcg
gatggggtcgagtcttcgtggaggctagatggttgccgtagcattgactctacagtttat
cctcttctcactctattcaacttgctgaaaaataaaccatttcagaaggctgactttact
ccggcagaacttgattctcggaaacgccttctaaatctagaaggtgattcagaagaagct
gcatctatgttgcctattgtgaagcgtagaaagggttgccaacaatttccagaacaaaac
aaagatgaacaaaccattacagagtcatctctaaataagcttatgggtgcagtagacgtt
tataacttggaggagatggaacccccaaatacacttttgtgtgatcttaggccgtaccag
aaacaagctctctactggatgtcaaaattagagcagggaattgatgttgaaaaggcagca
gaaactcttcatccatgctggtcagcctatcgcatatgtgatggaagggcttcctcaata
tatgtgaacgttttctcaggggaagcaactacaaaatttccaactgcaacacagatggca
agaggagggatattagctgatgcaatggggcttgggaagactgtgatgacaattgctcta
atacttgcaagacgaggcagaggatgccctgataacgaagagcttgacactgaaactgca
gataatgctcaaattacaaagaagaggaagatagattctcatataaatatctcatctaaa
acaaaaggtggcactctcattgtttgtcccatggcattgttaggacaatggaaggatgag
cttgaaacccattccgagccagaaagtatatccatttttgttcactatggtggggacagg
accaataacccaaaggtgatcgcagaacatgatgtggtcttgacaacatatggagtctta
actgcagcttacaaaagtgatgcagaggacagcatcttccacaaggtcagctggtataga
gtggttttagatgaagctcataccataaaatgctggaagactctaggcgctcaggctgcc
tgtgcattgtcctcgtgttgtcggtggtgtttaacaggaacccctcttcagaataatttg
gaagacctctacagccttctatgcttcttacatgttgaaccatggtgcaattgggcttgg
tggaataaactgattcaaaagccttatgagaatggtgatccaagagcgatgaaattgatc
aaggctattttgaggccgttgatgttgagaagaacaaaggaaacaaaggataaagaagga
aggcccatacttgttctccctccaactgacattcaaatcattgagtgtgaacaatcagaa
gctgaacatgacttttatgatgccctttttaggaaatctaaagtccaatttgaccagttt
gtggcacaaggcaaggtcctccacaactttgcaaatatccttgagttactactacgattg
agacagtgttgcaaccatccgtttcttgttatgagtcgagctgattcacaaaagtataca
gatctgaacaaacttgcaaaaaggttcctggaaactaatactgattctggcacaaatcag
actgtcccaactagagcatacattgaagaggttgttgagggtatacggaaaggtgaaaat
atggagtgccccatatgcatggagtttgcagatgaccctgtgctcactccttgtgcacat
aggatgtgccgggagtgtctcctctcaagctggcggaccccaacatcggggctatgccca
atttgtcggcaattgctaaaaaagactgagctcataacatgcccaacagaaaaccagttc
cgggttgatgttgagaataactggaaggagtcttcaaaggtttcaaaactcttggattgc
ttggaacaaatttgtgagtcaggttctggtgaaaagagcattgttttcagtcaatggact
tcatttttagatctcctggagatcccattgaagaggagaggagttggcttcttaaggttt
gatggaaagctggtgcagaagcaaagagagagggtcttgaaggagttcagtgaaaccaaa
gacaaaatggtattgttaatgtccctgaaagctggtggtgtaggtttgaatttaactgct
gcctctcatgtattcttaatggatccttggtggaatcctgctgtagaggagcaagcaata
atgcgaattcatcgcattggacaaaagcgaacagttcgtgttagaaggttcattgttagg
gacacggtagaggagagaatgcaacaagtccaggcacgaaagcagcgaatgattgcagga
gccctcacagaagaggaggttcggacggctaggattgaggagctcaaaatgctcttcaga
taa

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