Quercus lobata (valley oak): 115993887
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Entry
115993887 CDS
T07350
Name
(RefSeq) uncharacterized protein LOC115993887 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115993887
Enzymes [BR:
qlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
115993887
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115993887
Prokaryotic type
115993887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
115993887
NCBI-ProteinID:
XP_030973730
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All DBs
Position
6:14360216..14363074
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AA seq
347 aa
AA seq
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MSYAAVVVGSAFVPSLPLNLNPNPNPNPNGSLPSPNNTSQSTGGGAEDPNHYTMKPTVTV
AASSGFKWRLVIAYDGTHYSGWQYQQSPPTIQCIVEKALTQATKLERKDLLLVGASRTDK
GVHALCQVAHFVTPFNYDSLESIHAALNGLLPSDIRVREISPAMHEFHARFSAKRKIYHY
KIYNDTIMDPFQHRYAYHSAYKLNAAVMREAASYFIGKHDFSAFVNASHNDRVRDPVKNI
FRFDVIEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPMILASRDRKELAK
YALSAPPHGLCLVNVNYNEEHLGLPSDCPKTSFGRHHTISKCKLPSY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgctgcggttgtggtagggtcagcctttgttccttctcttcctcttaatctt
aatcccaatccaaatccaaatccaaatgggtctcttccttcacccaataatacttcgcag
agcacgggtggtggtgcagaggaccctaaccattatactatgaagccaacagtaacagtt
gctgcttcttctggttttaagtggcgtttggttatagcatatgatggcacccattattca
ggttggcaatatcagcagtcaccaccaaccatacagtgcattgtggaaaaagctttaact
caagcaacaaagttagaaaggaaggatctccttttggttggtgcgagtaggacagataag
ggagttcatgccttgtgtcaggttgcacactttgttacacctttcaactatgacagcttg
gaaagcattcatgcagctctgaatggtcttcttccctctgatatccgtgttcgagagatt
agccctgccatgcatgaattccatgctcgattctcagcaaaaagaaagatttatcattac
aagatatataatgacaccataatggacccatttcagcatcgctatgcttatcacagtgcc
tataaacttaatgctgcggtcatgagagaagctgcaagttattttattggaaagcatgac
ttctctgcttttgtcaatgcgtctcacaatgatcgagtgcgagatccagtgaagaatata
ttccgttttgatgtcattgaaatgggagctcttttgcagctagaagttgaaggttcaggt
ttcttatatagacaagtgcgaaacatggttgccttgcttcttcaaattggaaaggaagca
attcctcctgatattgttcccatgattttggcaagtcgagatcgcaaggagctggctaaa
tatgctttgtctgccccacctcatgggctgtgtcttgtaaatgtaaactataatgaagag
cacctagggcttccatcagattgccccaaaaccagttttggtaggcatcatactataagc
aaatgtaagcttccatcttactga
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