Quercus lobata (valley oak): 115994014
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Entry
115994014 CDS
T07350
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115994014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115994014
Enzymes [BR:
qlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115994014
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
115994014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
115994014
NCBI-ProteinID:
XP_030973885
LinkDB
All DBs
Position
6:complement(7419384..7452773)
Genome browser
AA seq
1401 aa
AA seq
DB search
MNVQAQAQAQDMVFTKQPYIEDVGPRKIQSMNFSTLSESEISRIAEVQVYKGQYYDAARI
PIEGGLLDPRMGPNKEGICATCHGKFDSCPGHFGYIKLALPVYNVAYRDNIMNILKCICK
SCARILLVEDIRKEFLKKMRNPRLEALKKAELLKEIVKKCNSLTGSKKAFKCSRCGYINA
LVKKAGPPILGFNHERPNSNDGTMEEFRSAISHTKDSKTVFSAPTFNLNTVDVLALFKKM
VDEDCELLYLSDRPEKLIMENIAVPPVPIRPSVIMSGSQSNENDITERLKRIIQANASLR
QELLEASTASNRLAGWDVLQLEVAQYINSDVHVPLSMQASRPLGGFFQRLKGKQGRFRGN
LSGKRVEYTGRTVISPDPNLKITEVAIPIQMARILSYPERVSHHNIEKLRQRVSNGRDKY
PGAQVVINADGSKRIPVYGAKKQIADALRYGDIVHRHLEDGDIVLFNRQPSLHRMSIMCH
RARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGE
ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMVDGMDPVDLPTPAILKPIELWTGKQ
LFSVLVRPHANVRVYVNLTVKEKSYTKPNKEGEREKEAMCPNDGFVYFRNSELLSGQLGK
ATLGNGNKDGLFSVLLRDYKAHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPSKYLNER
RLETISRGYQGCHEKIKFYNEGKLPPETGCDAAQTLEAEITRILNNIRDETGKVCMKELH
WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPAAKG
FVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRS
ASGCVVQFRYGDDGMDPAYMEGKNGAPLNFDRLFLKAKATCPAGGNACLSPSEVSERVES
RLSEDDMTPEGGCSVAFKNSFKFFLDEYVKSLTKTRETLESVESLAGEENSEIRERVIKN
ISGVTPKQLEVFLNTCISRYHLKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN
ITLGVPRIKEIINGAKKISTPIITAALKSDNNVNTARMVRGRIQKTNLGQVAKSIKLVMT
SRLASIIVTLDMERIRDAQLCIDANNVKESIIQAKIKVKNEHITILDGGKLEIRPSETDR
SKMHFHLHSLKNVLPTVIVKGLKSVERAIIKKEENKKMKTIKYGLLVEGSGLQDVMGIEG
VDGRKTTSNHVIEVQQTLGIEAARKCIIEEIKYTMESHGMNIDIRHMMLLSDVMTFRGEV
LGITRFGIQKMGKSVLMLASFERTTDHLVNASVNGRVDRIEGVSECIIMGIPMQIGTGML
KVRQRVNLPSELHYGSDPILC
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcaagcgcaagcgcaagcacaagacatggtcttcactaagcagccctacatc
gaagatgttggcccccgcaagatacaaagcatgaacttcagcacgttatccgaatcggag
atcagtagaatcgccgaggttcaagtatataaaggccagtattatgatgcagcaagaatt
cctatcgaaggcggcttattggatccacgaatgggcccaaataaggaaggcatatgtgca
acatgccatgggaaatttgatagttgtccgggacactttggatacataaaacttgccctc
ccagtttacaatgttgcatatagggataacattatgaacattttaaagtgcatttgtaag
tcatgtgctcgcatacttttggtggaggacatacgtaaagagtttttgaagaagatgagg
aatcctagattagaggctctgaagaaggccgaattactgaaagagattgtaaaaaagtgc
aatagcttgacaggttccaagaaagcatttaagtgctcaagatgcggatatataaatgct
ttggtgaagaaagctggtcctcctatcctgggctttaatcatgagcgtccaaactctaat
gatggaactatggaggaatttagatcagcaatctctcacacaaaagattctaagacggtc
ttcagtgcacctacttttaatcttaacactgttgatgttcttgcactttttaaaaagatg
gtggatgaggattgtgagttgctttatctttctgatagaccagagaaactcatcatggaa
aacatcgcagtacctcctgtacctattcgtccttctgttatcatgagtggatctcaaagc
aatgaaaacgacattacggagaggttaaagcgaattattcaggcaaatgctagccttcgt
caggagttattagaagcaagcactgcatccaatcgtctggctggttgggatgttcttcaa
cttgaggttgcacagtatataaatagtgacgttcatgttccattatcaatgcaagcttcc
aggccattaggtggcttttttcagcgcctaaaggggaagcaggggcgatttcgtgggaat
ttgtcagggaagcgtgtcgaatatactggcaggactgttatatcacctgacccgaatctg
aaaattactgaggttgcaatccccatccaaatggctcgaatcttatcttatcctgaacgt
gtttctcaccacaatatagagaagttgaggcaacgtgtcagtaatggccgcgataaatac
cctggtgcacaagtggtcataaatgctgatgggagtaagaggatcccagtttatggtgct
aaaaagcaaattgctgatgcactgagatatggtgatatagttcaccgtcatttagaggat
ggggacattgtccttttcaacagacagccaagcttgcatcggatgtccatcatgtgtcat
agggcaagagttatgccttggagaacattgagattcaatgaatctgtgtgcaatccatat
aatgctgattttgatggtgatgagatgaatatgcatgtcccacaaacagaggaggctcga
acagaagctgttatgttgatgggggtgcaaaacaatttatgtacaccaaaaaatggagag
attttggttgcttccactcaagattttctaacgtcttcttttctcataacaaggaaggac
acgttttatgaccgtgcagctttttctcttatgtgttcttatatggtggatggcatggat
cctgttgatttgccaactcctgcaatacttaagccaatagagctttggactggcaagcaa
ttatttagtgttttagtgaggccacatgcaaatgtgagagtctatgtaaatcttactgta
aaggagaaaagctacaccaagcctaataaagaaggagaaagagaaaaagaagccatgtgc
cctaatgatgggtttgtctacttccgtaatagtgagctattatctggacagcttgggaaa
gccactttaggaaacggaaataaggatggacttttctctgttcttcttagagactacaaa
gcacatgctgctgctacatgcatgaatcgtctagctaaattgagtgcgcggtggataggt
aaccatgggttctcaattgggattgatgatgtccaaccaagtaaatatttgaatgaaagg
agactggaaacaatctctagaggttatcaaggttgccatgagaaaataaagttttacaat
gaaggaaagctaccgcctgaaaccggatgtgatgctgctcaaacactagaggctgagata
actagaattttaaataatattcgagacgaaactggcaaggtctgcatgaaagaattacat
tggagaaatagtcctttgattatgtcccagtgcggttccaaaggatctcctatcaacatc
agccaaatgattgcttgtgttggccagcaatcagttgggggtcgtcgtgctcctaatggg
ttcatagatcggagccttcctcatttccctagaaaagcaaaaacacctgcagccaaaggc
tttgttgctaattctttctatagtggtttgacagccactgaattttttttccatacaatg
ggaggtcgagaaggccttgtggatacagcggtaaaaacggctgacactggatacatgtca
cgaagattgataaaagcgcttgaggacctatctatccattatgatgatacagtacggagt
gcaagtggatgtgtagttcaatttcgttatggagatgatggcatggatcctgcatatatg
gaaggaaaaaatggagctcctttgaattttgaccgattgtttttgaaagccaaggctaca
tgtcctgctggagggaatgcatgtctttctccttctgaagtgtctgaaagagtggaaagc
aggctttcagaggatgatatgactcctgagggtggttgttctgtggcatttaaaaattct
ttcaagtttttcttggatgaatatgtaaaatctctaacaaaaacaagggagacattggaa
tcagttgaaagtcttgctggagaggaaaattcagaaattcgggaaagagttatcaaaaat
atatctggagttacccctaaacagctagaggttttcttgaatacctgcatctctcgttat
catttaaaaaaaatagaagctggaactgcaattggagcaattggagctcaaagtattgga
gagccagggacgcagatgacacttaaaacttttcactttgctggagttgcaagcatgaac
attacacttggagttcctcgtatcaaagaaataataaatggagccaaaaagatcagtaca
cccatcatcactgcagcactcaagtctgataataacgtgaatactgcccggatggtaaga
ggtcgaattcagaaaacaaatttaggccaggttgctaagagtataaaacttgtaatgact
tcaagattagcatcaataattgtcacacttgatatggagagaattcgagatgcacaattg
tgtattgatgctaataatgtgaaagaatcaattatacaagcaaaaatcaaagtgaagaac
gagcatattacgattttggatggtgggaagttggaaattcgtccttcagaaaccgataga
agtaaaatgcattttcatctccactctcttaaaaatgtgcttccaacagttatagtaaag
ggtttaaaaagtgtcgagcgtgccattattaagaaagaagaaaataaaaagatgaagaca
atcaagtatggtcttctggtagaaggctcgggtcttcaagatgttatgggcattgaagga
gtagatggtcgtaaaaccacaagtaatcatgtcattgaagtgcagcagacacttggcatt
gaagctgcaaggaagtgtattattgaggagataaaatatacaatggaaagtcatggaatg
aacatagacattcgccatatgatgctcttatcagatgtgatgacatttaggggtgaagtg
cttggaatcacaagatttggaatccaaaaaatgggcaagagtgtgttgatgctggcttca
tttgagaggacaacagatcaccttgtcaatgcttctgtaaatggtagggttgacaggatt
gaaggagtaagtgaatgcataatcatgggtataccaatgcagataggcactggaatgctc
aaagttagacaaagagttaatctaccttcggagctgcattatgggtcagatccaattcta
tgttga
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