Quercus lobata (valley oak): 115994285
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Entry
115994285 CDS
T07350
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115994285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115994285
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
115994285
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
115994285
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
DUF530
RNF220
Motif
Other DBs
NCBI-GeneID:
115994285
NCBI-ProteinID:
XP_030974220
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All DBs
Position
6:complement(27718978..27738556)
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AA seq
890 aa
AA seq
DB search
MLKGRESVVRLVGKRRRFLPNRETLLSASDDLELELVTCPVCTLKISAQHHAINAHLDIC
LSESETPTGTKRKLSQRTLLDSNFLSNSKIHQSQLTNNDDFCGSRHSNSHSHIINNDVVV
DAPKAKAAAAAAAADVDVTMENVSGVTLQTFIVGRRFFSHENELHVGANISLLPDPHNVK
DPNAIKVLSADSGSCKCKVLGFLPRELAQYLSPLMEKYCLSFEGYVTSVPKNPFDFVPIM
IVCHKMILHGEKEYEDVEAFKCLWKYAIHVVESTKNCPPGITKYQQNFCLVIHEVIRSNP
HLFTDDEKKFMESFTSLSNDSQRLFVRLYTRKGPWFRISTISYSEVLDPQEAIKGLSAMG
YICLFEDKDKLHDNDIKEILNLLTVSELHDILCKLKKNCNHGRRKSDLLESLLPSFVGGL
CPHLTSLVLDKTGACFRISSKAESLIWRAERLFFLNGEQNLSTFLLVDLGIVKYPTYDCI
ISEQIFPGPDDLLAYEEAIEVAQLMDEALDGNNVELVLRCIKIADSRISSSSMKTMESTT
SELVATFYSSFSASWVYSKVVLLGVSFLERERRYNDAINLLKRLLNCFTCDGRRGYWTLR
LSINLEHTGYPNESLTVAEDGLQDPWVRAGSRMALQMRILRLGKPPRRWKTPSFSASIKR
KITEVHVQGRPLNCEMGMKNRFYGEDGEQCGVEQLALQYYAGEGGGWQGVHTESGIWLTI
FGLLMWDIIFSNVPNVFRTRFQTAPLDMETDSFYLARKSCIESHLQKIHDGMGEEILITS
WESHVGTACRGVNWDRHSLAELRAAVTCIGGPCLASLCRHLAQDYRSWSSGMPDLLLWRF
HGEYRGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNTEVCKVSPVSMSA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagggaagagagagcgtggtccgattagttggcaaacggcggcggttccttccc
aatcgtgaaactctgttgtctgcttccgatgatttagaattagaattggtaacctgtcct
gtttgcaccctcaaaattagtgctcaacaccatgccatcaacgctcatctcgatatatgt
ttgtctgaaagtgaaaccccaaccggaaccaaacggaaattgagtcagcgtacccttctt
gactcaaacttcttgtctaactctaagattcatcagtcacagttaacaaacaatgatgat
ttttgtggatcgcgacactccaactctcactcccacatcatcaacaatgatgttgttgtt
gatgcgcctaaggctaaagcagcagcagcagcagcagcagctgatgttgatgtaactatg
gaaaacgtatctggggttactcttcaaacctttattgttggtcgtaggttttttagtcat
gaaaatgaattacatgttggggcaaacatttctcttctaccagatcctcataatgttaag
gatcccaatgctattaaggttctttctgcagattctggttcctgtaaatgtaaagtgctt
ggttttctccctcgtgaattagctcaatatttgtcccctttaatggagaagtactgccta
agctttgagggatatgtgacttctgttccaaagaatccttttgattttgttcccattatg
atagtgtgtcacaagatgatattgcatggtgaaaaagaatatgaagatgtagaggctttt
aaatgtttatggaaatatgctattcatgtggttgaatccacaaaaaattgtccacccggc
atcacaaaatatcagcaaaacttttgcctagtcattcatgaagttataagaagtaatcct
cacctattcacagatgatgaaaaaaaattcatggaatcatttacttcactctcaaatgat
agtcagcggctttttgttcggctctatacacgaaaagggccatggtttcgaatatctact
atttcctattcagaagtattggatcctcaagaagcaatcaagggtctctctgcaatgggt
tatatatgtttatttgaagataaagataaactacatgacaatgacattaaggagatattg
aatttgctcactgtttctgagctacatgatattttgtgcaagcttaagaagaactgtaat
catggtagaagaaagtcagatcttcttgaatctcttcttccttcatttgtaggtggatta
tgtccacacctaacaagtttggttttggataaaactggtgcctgttttaggatatcttca
aaagctgaatcccttatctggcgtgctgagaggcttttcttcctgaatggagagcagaat
ctatcaacattcctactagttgatttgggaatagtcaagtatccaacttatgactgcata
atctcagaacaaattttcccaggtccagatgacctgcttgcttatgaagaggccattgaa
gttgcacaactaatggatgaagctcttgatggaaacaacgttgaattggtgttaagatgc
ataaagatagctgactcccgtatatcaagctcttctatgaaaacaatggaatccacaacc
tctgaattagtggctacattttattcatcattttcagcatcatgggtctactcaaaagtg
gtcttgttaggagtttcctttcttgagcgggagcgcagatataacgatgctataaatttg
ctgaagcggttgctaaattgttttacttgtgatggaagaagaggatattggaccctaagg
ttgtcaattaatttggagcacactgggtatcccaatgagagccttacagttgctgaagat
ggattacaggatccatgggtgcgtgctggttcaaggatggcactgcaaatgcgaatcctt
cgattaggaaaacctccaaggcgctggaaaactcctagtttttcagcatctatcaagagg
aagatcacagaggttcatgttcaagggagacctttgaattgtgaaatgggcatgaagaac
aggttttatggagaagatggggagcagtgtggagttgagcagcttgccctgcagtactat
gctggagaaggaggtgggtggcagggtgttcatacagagagtggcatttggttgactatt
tttgggctgttgatgtgggacattatattttctaatgtaccaaatgtattccgtaccaga
tttcagactgcccccttggatatggagactgatagcttttatctggcgaggaagagctgt
atagaatctcatctacagaaaattcatgatggcatgggtgaggagatcctcatcacgtca
tgggaatcccatgtaggaacagcttgtaggggagttaattgggaccggcattccctcgcc
gaacttcgggcagctgttacatgcattggtggcccttgtttggcctcactttgccgccat
cttgcacaagattaccgaagctggtccagcggaatgccagatttgttgctgtggcgcttt
catggggagtacagaggtgaagccaagcttgttgaagtgaaaggccccagggatcggctc
tctgaacagcagcgagcatggctacttcttctgatggattgtgggtttaatacagaggtt
tgtaaggtgagccctgtgtcgatgtctgcatga
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