Quercus lobata (valley oak): 115994368
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Entry
115994368 CDS
T07350
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115994368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115994368
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
115994368
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
115994368
NCBI-ProteinID:
XP_030974349
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Position
6:complement(53013534..53024491)
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AA seq
1235 aa
AA seq
DB search
MRSINPLPEAVRSAVRSGIILFDITRVVEELVFNSLDAGATKVSVYVGVGTCYVKVVDDG
SGITRDGLVLLGERYATSKFHQLADMDVASGCFGFRGEALASISDVSLLEIVTKAYGRPN
GYRKVIKGCKCLYLEIDDDRKNVGTTVTVRDLFYNQPVRRKYMQSSPKKVLHSVKKCVLR
IALVYSQVSFKVVDSESGDELLCTHPSSPLSLLTSGFGIESDSFHELNASDGTLKLSGFI
SGPCDGFGIKAFQYVSDINSRFICKGPIHKLLNQLATRFECLDSWAVNDGSQNRKRSRSQ
AYPAYILNLICPRSLYDLTFEPSKTYVEFKDWGPILAFTEKAIQRFWKDNLAFGDSISHA
TDIIRKDKMWREVDDIISAEEDFLEVDLSETSEIAEKKCRIQNHKASIDIFSSPSEMLMK
EVNLLSHTHNRIPSGNLQKISAEFKEQQVEMGFVCQKDYALQSWDGLEAKSIPTVLCRYD
NHLLKSDNNSLSMEDHFLENRFDDNVEENSLSSACRVQSLKVVPDVDIESAGRALSCDFF
SRDIKRPLLQGCSSQQRLPLERSLFVNDEGFEFQRNGSMTDWKQAGTHDKVNILEVEGSN
HTFDFLSRSLWQDEASCSQAFTREITKCELPREFDFSSRAYVKSDPSFGEHFIEDVLESD
SLTQIANFGSGKWTSNSDWCCPTSDPLFQATPWDVEHFEDKNAPVVSFHSGESTSYGHFV
DNRKRGCKSSYDIMSKVSSLENGTSSGTYSKLEFNGISDSSRDFCEFLQRDNQDCRFPDI
LPDETDWLYLNSCAKDKDIDKYKGQRDSTRYQDCEQDHFPKERSRSHSAPPFYRRKRRFF
SLNHPEGKPDAKTFDNALTYPEADKLKHAKQPSGISHLISKPNSVEHLLSETRPDMEKKM
AGISDLKEIEGEKYGQSHYLDIQDTIPVKVSNSNETQDSMDSWSKWQNCSSQITNKNRSC
GVHDESKILDISSGFLHLASDSLIPKSINKNCLGNAKVLQQVDKKFIPVVAGGTLAVIDQ
HAADERIRLEELRKKVLSGEAKTRSYLDVEQELTLPENAYQLLQYYAEEIKDWGWICNIY
GQDSRSFKRNLNILHRRPTAVTLIAVPNILGVNLSDVDLLEFLQQLADTDGSSTIPPSVL
RILNMKACRGAIMFGDSLLLSECSLIVEELKKTSLCFQCAHGRPTTVPLVNLEALRKQVA
KVGFLGDSSSELWHGLRRQKLSIERAAQRLSSARG
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcatcaatcccttgccagaggcagttcggagtgcagtgcgttccggcatcatc
ctcttcgacatcactagggttgtggaagagctcgtttttaatagcctcgatgccggtgcc
acaaaggtatcagtttatgtaggggttggcacgtgttatgtgaaagtggtggatgacgga
tccggtattactcgggatggattggttttgctgggagaaagatatgcaacatcaaagttt
caccagttggctgatatggatgttgcaagtgggtgctttggctttcgtggagaagcattg
gcttccatttctgatgtctcattgttggaaattgtaacaaaagcatatgggaggccaaat
ggatatcgtaaagtcattaagggatgcaagtgtttatatcttgaaattgatgatgacagg
aagaatgtaggcaccacagttactgttcgtgatttattttacaaccagccagttcggagg
aaatatatgcaatccagccccaagaaggtgttgcactcagtcaagaaatgtgtacttagg
attgcccttgtctactcgcaagtttccttcaaagttgttgatagtgaaagtggggacgaa
cttctttgcactcatccttcttctcctttgtcactattgacaagtgggtttgggattgag
tctgactcttttcatgaattgaatgctagtgatggtacactgaagctttctggcttcata
tccggtccatgtgatggtttcggaatcaaggcctttcaatatgtctcagatattaactcg
cggttcatttgcaaaggtccaattcacaaactactgaatcaactggccactaggtttgag
tgtttggattcatgggcagtcaatgatgggtcccaaaacaggaagagaagtaggtctcaa
gcatacccagcttatattttgaatctaatttgccctcgatctctctatgatttaaccttt
gaaccatcaaagacatatgttgagttcaaggattggggtcctatacttgccttcactgag
aaggccattcaacgattttggaaggacaatctagcttttggggactccattagtcatgca
actgatataataagaaaggacaaaatgtggagggaagttgatgatatcatatcagcagaa
gaagattttcttgaagtagatttgtcagaaacctctgaaattgcagaaaagaagtgcagg
atccaaaatcataaagcttctattgacattttctcttcaccttcagagatgctaatgaaa
gaggtcaaccttttgtctcacacacacaatagaattccttctgggaacttgcagaaaatt
tctgctgaatttaaagagcaacaagttgagatgggatttgtttgtcaaaaggattatgct
ttacagtcatgggatggtcttgaggctaaatctatacccacagtgttatgtaggtatgac
aaccatctgttgaaatctgataacaattctttatccatggaagatcatttcttggaaaat
agattcgatgataatgtggaggaaaatagtttaagttcagcatgtagagttcagtccctt
aaagttgttccagatgttgacattgaatcagcagggcgtgcattatcttgtgactttttt
agcagggatataaaaagacctttgctgcagggttgctcttcacaacaacgcctgccactt
gaaaggtctttgtttgtaaatgatgaaggatttgaatttcaaagaaatggctccatgact
gactggaagcaagcaggtactcatgacaaagttaatattctagaagttgagggcagcaac
catacttttgatttcctttcgaggagcttgtggcaagatgaggcatcatgctctcaggcc
ttcaccagagaaattacaaaatgtgaattgcctagagaatttgatttttcgtccagagct
tatgtaaagtcagatccatcttttggagaacatttcattgaagatgttcttgaatctgat
tcactcacacaaatagcaaactttggctctggtaaatggacctcaaattcagactggtgt
tgcccgacctcagatcccttatttcaagctacaccatgggatgttgagcattttgaggat
aaaaatgcccctgtagtgagttttcactcaggtgaaagcactagttatgggcattttgtg
gataacagaaaaaggggctgcaaatctagttatgatatcatgtcaaaggtctccagcctg
gaaaatggcacctcaagtggtacatatagcaaattagaatttaatggtatttctgattct
agtagagatttctgcgaattccttcaaagagacaatcaagattgtagatttccagatata
ttaccagatgagacagactggttatatctgaactcgtgtgctaaagataaagatattgat
aagtataaaggccaaagggattcaacgagatatcaagattgtgaacaggatcattttcct
aaagaaagatcaagaagccattcagctccaccattttacagaagaaaaaggaggttcttt
tccttaaatcatcctgaaggaaaacctgatgccaaaacctttgataatgcccttacctat
ccagaagcagacaagttgaagcatgcaaaacaaccttctggtatttctcatttaatttct
aagccgaattctgtggagcatttgttgtcagagactagaccagatatggagaagaagatg
gcaggcatttcagacctgaaggagattgaaggagaaaagtatggacagtcccattatctt
gacattcaagataccattccagttaaagtctccaactcaaatgaaactcaagattcaatg
gattcatggtccaaatggcagaattgctcttcccagataacaaacaaaaatagatcatgt
ggtgttcatgatgaaagtaaaattcttgacatctcttcgggattcttgcatcttgccagt
gattcattaattcctaaatctatcaacaagaactgcctgggtaatgccaaagttcttcag
caggtggataagaaattcattccagttgtggctggtggaacacttgccgttattgaccag
catgctgcagatgaaaggatccgactggaagaactgcgaaagaaggtgttatctggagag
gcaaagacaagaagttatcttgatgttgaacaagagttgacactgccagagaatgcctat
cagttactgcaatattatgctgaagagataaaagattggggttggatctgcaacatttat
ggccaagattcaaggtctttcaagaggaatttgaatattctccacaggcggccaacagct
gtcacacttattgcggtacccaacattttaggtgtcaatttatctgatgtagatcttttg
gaatttcttcagcagcttgctgatacagatggatcctcaacaatacctccttcagttctt
cgaatccttaatatgaaagcatgcagaggtgcaattatgtttggggactcattgttactt
tcagaatgctccctcatcgttgaagagctaaagaagacctcactttgttttcaatgtgct
cacggacgtcccacaactgtccctcttgtcaacttggaggccttgcgcaagcaggtagct
aaggtcggatttttgggtgatagttcaagtgagttgtggcatggtttacgtcgacaaaaa
ctcagtattgaacgtgcggcacagcggttaagttctgcaagaggttag
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