Quercus lobata (valley oak): 115994395
Help
Entry
115994395 CDS
T07350
Name
(RefSeq) glycogen synthase isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00500
Starch and sucrose metabolism
qlo01100
Metabolic pathways
qlo01110
Biosynthesis of secondary metabolites
Module
qlo_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
115994395
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
qlo01003
]
115994395
Enzymes [BR:
qlo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
115994395
Glycosyltransferases [BR:
qlo01003
]
Polysaccharide
Storage polysaccharide
115994395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
TcaA_2nd
DUF3276
Motif
Other DBs
NCBI-GeneID:
115994395
NCBI-ProteinID:
XP_030974389
UniProt:
A0A7N2M0J3
LinkDB
All DBs
Position
6:37716126..37730509
Genome browser
AA seq
717 aa
AA seq
DB search
MLTMTSLNAVTIPSPPNPTAALRKPLRPRPVCCLRKNRGGNGLYNKGSPRVDLFRSAGLD
NMEIHQSSNGELEVKRNNIGKLFREAQQNILYLNKQRLVAVEELNKANREKQLLLDRIER
LEVEKQAGVGKVEELDKANREKQLLLDRIERLEVEKQAGVGKDKLSLCWELLLRIDSMVL
SGMISAGEASDFRRLIMDHKVIVADAFNEILQKKDAELLAELLQFSDRSKKSGFHVIHIC
TEMSPLVSVGSLASYVTGLSCALQRKGHLVEVILPKYAIMDLDEVQGLQEIKAGFYSYFN
GQQHGNRIWTGVVNGIGVSFIEPLYYSSFFSREKVYGYSDDFERFTYFSRASLDYIVKSG
KQPDVLHIHNWETAIVGPLFWDIYVNQGLGGTRILLTCHDFDSQCLEQPDKLSLCGLDPP
RLHRPDRLQDNTKTHLVNILKGGIVYSNQVVMVSSMNSKGRIISSFSHELKPTLSIHQDK
LVIAPYGFDKSTWDPSKDNFLPENYSAEDMKGKTVCKVALQQHLALSGSASSILVGCFFA
ELSEIDMENLKAVVQNATRRGVQVILVEISKNSITNKKLESFQELLKDQNVRFINRLGEA
ISHLVFAGSDIILCQSFHEPDLQVPLKALKYGAAPIAITSTDDISRNFVDYDYERTKFSQ
FISSNFGKMSLSQALDEIENNPSRWNRKILAAMAMDFSWDAECCDVHVSAYTAIKKL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgatgacttcactgaatgcagtgacgatcccttcgcctccaaacccaaccgca
gcgctccgcaaacctcttagacctcgacccgtttgttgtttgaggaaaaacaggggcggc
aatggcttatataataaagggtcaccacgtgtggacctttttaggtcagcaggtcttgat
aatatggagattcatcagtcatcaaatggggaactggaagtgaaacggaataacattggg
aagctttttagagaagctcagcagaacatattgtacttgaacaaacaacgtctcgtggca
gtggaggagctgaacaaagcaaatagagagaagcaactgttgcttgataggatagagcga
ttagaagtagaaaagcaagctggtgtgggaaaagtggaggagctggacaaagcgaataga
gagaagcaactgttgcttgataggatagagcgactagaagtagaaaagcaagctggtgta
ggaaaagataagctatcactttgttgggagttgctgcttcggatagactcaatggtcctc
agtggcatgattagcgctggcgaagcatctgatttcagaaggctgatcatggatcacaag
gttatagttgctgatgcttttaatgaaatcctgcagaagaaagatgctgagcttctagca
gaactcctccaattctcagatagaagcaaaaagagtggctttcacgttatccatatttgt
actgaaatgtcaccgctggtctctgttggatctttggcatcttatgtgacaggcttatct
tgtgcactacaaagaaagggccacttggtggaggttatactgccaaagtatgcaattatg
gacctagatgaagttcaagggctgcaagaaattaaggcggggttttattcatattttaat
ggtcaacagcatggaaacagaatttggactggtgttgtcaatggcattggagtctctttt
attgaacctttgtactactcgtcatttttcagccgtgagaaggtatatggctactcagac
gactttgaacgatttacgtatttctctcgtgcttcattggactatatagtaaaatctgga
aagcagcccgatgtgctacacatacacaactgggagactgctattgttgggccacttttc
tgggatatatatgttaaccagggacttggaggtactagaatattattgacatgccacgac
tttgattcacagtgtcttgagcaaccggataagctttcactatgtggacttgatcctcct
agacttcaccgtccagatcgtttgcaagataacactaagacacatcttgtcaatattttg
aagggcggaattgtttactctaatcaggttgtgatggtgtcatccatgaactcaaaaggc
agaatcattagtagtttcagtcatgaattaaaacctaccttaagcatccaccaggacaag
ttggttattgctccctatggatttgacaagtccacctgggatccttctaaggacaacttt
cttccagaaaattatagtgcagaggatatgaaagggaaaactgtttgcaaagttgcatta
cagcaacacctggcgttatctggcagtgcttcttctattcttgtcggatgcttcttcgca
gaactatcagaaattgatatggagaacttgaaggcagttgttcagaatgcaaccaggaga
ggcgtccaggttattttagtggaaatcagcaaaaattcaatcacaaataagaaactggaa
tcttttcaagaactcctcaaggatcaaaatgtgagatttataaacagacttggtgaagct
atatcacatttagtctttgcaggatctgacattatcttgtgccaatcttttcatgaacct
gatctccaagtgccactcaaggctttaaaatatggagccgcgccaattgcaataacctcc
actgatgatatttccaggaactttgtagattatgactacgagaggactaaattctcccag
ttcatcagctctaactttggaaaaatgtccttaagccaagccctagatgaaattgagaac
aatccatccagatggaatcgaaaaatattggctgcaatggcaatggacttctcctgggat
gcagagtgctgtgatgtgcatgtttctgcctacactgccatcaaaaaattgtga
DBGET
integrated database retrieval system
