Quercus lobata (valley oak): 115994439
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Entry
115994439 CDS
T07350
Name
(RefSeq) YTH domain-containing protein ECT2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115994439
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115994439
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
115994439
NCBI-ProteinID:
XP_030974453
UniProt:
A0A7N2LWC1
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Position
6:complement(13650528..13657039)
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AA seq
701 aa
AA seq
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MEMYNVSENGNTETYLIQGTEASPHLTSPLLEQIETMYNEAAPEFVVDQSMYYPTATNYG
YYCTGFESPGEWEDHHRIFGVDGPDIQYAGVHNESPPYVYYTPGYGYAQSPYNPYNPYIP
GAMIGDESQIIGSPQYYLIPSYQNPVSPPAYVPLVVQPDAVPSSSVDSSYDTGVSMNRFD
GRGLKHNFSSATGAFPRNSLKSVSNQTNSLSRVSEGPRATVGPSKQSVMHGSVSAGNFAP
PASSHVLQGRSASGSIPAVDNISNGKVLSHHNQLKVTLPAGNGLSDFGSSAYGQGAGAKI
RPKIHVGRALNDVTGGPDALVEQNRGPRTNRSKNQLAVKAYTSKAGDGNAHGNIVIYTDQ
YNKEEFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLDAAYEDAQRMAAGKP
RGCPIFLFFSVNASGQFCGVAEMVGSVDFTKDMDFWQQDKWSGSFSVKWHIIKDVPNTNF
RHIILENNENKPVTNSRDTQEIMYKKGLEMLKIFKNHTLKTSLLDDFIYYENRQKIMKEE
KSRLLIKSIESPYFVPSLDPPLRLNRVELLPSEDEKTIKPNDGLNYSIKTGVAAPEQVSI
SDVPNTKFLDGNAKHITVGAKDDVASTLKIGSLTINPKKAEPKPLPSSAIANNDIVTVGS
VPIKVNGFAESGILTVGTIPLDPKALKLDKGGASVNIGSQR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtataatgtttctgaaaatggaaacacagagacttatctgattcaaggtacc
gaagcaagcccacatttgacaagtccacttcttgaacaaattgaaactatgtacaacgaa
gcggcacctgaatttgttgttgatcagagcatgtattatcctactgccaccaactatggg
tattattgtacaggatttgaatcacccggtgaatgggaggaccaccataggatttttggt
gtagatggtccagatatccaatacgcgggtgtgcataatgaaagccccccttatgtatat
tatacgcctggctatggatatgcacagtctccatacaacccatacaatccttacatacct
ggtgctatgataggagacgaaagtcagattattgggtcaccacaatattaccttattccc
tcttatcagaaccctgtttctccacctgcttatgttccccttgtcgttcaaccagatgcc
gtccctagtagttcagtcgactcctcatatgatactggtgtatcgatgaatagatttgac
gggagaggtttaaaacataatttcagttcagctactggagcctttccaaggaactccctg
aaatccgtttcaaatcagacaaattccctgtccagagtttcagaaggaccaagagctact
gttggaccaagcaagcaatctgtgatgcatgggagtgtttctgctggtaattttgcccct
ccagcttcatcacatgttcttcagggtagaagtgcctctggctcaattccagctgtagat
aacatttccaatggaaaggttctatctcatcataatcaactgaaagtgacacttccagct
ggtaatggtttatcagactttggatcaagtgcctacggacagggtgcaggggctaagatt
cggcccaagatccacgttggtagagcactgaatgatgtaactggtggcccagatgcattg
gttgagcagaatcggggccctagaaccaacagatcaaaaaatcaactggctgtcaaagcc
tacacaagcaaggcgggagatggtaatgcacatggaaacattgttatctatactgatcag
tataacaaggaggaatttccagttgattatgtggatgcaaagttctttgtaataaaatca
tacagtgaggatgatgtacataagagcattaagtataatgtttggtcatctacaccccat
ggaaacaagaagttggacgctgcttatgaagatgcacagagaatggctgcagggaagcct
agaggctgccctatcttcctcttcttctctgttaatgcaagcggtcaattctgtggtgtt
gcagagatggttggctcggttgacttcactaaggatatggatttttggcagcaagataaa
tggagtggaagcttctctgtcaagtggcacatcatcaaagatgtcccaaacacaaatttt
agacacattatcttagaaaataatgagaacaagccagtgactaatagcagagatacacaa
gagatcatgtataagaaaggccttgagatgttgaaaatcttcaaaaatcacacattgaag
acctcattacttgatgatttcatttactatgaaaatcgtcagaaaatcatgaaggaagag
aaatccaggttacttatcaagagcatagaaagtccatattttgtaccttcattggatccc
cctcttaggcttaatcgtgttgagctacttccaagtgaagatgagaaaactatcaagcct
aacgatggcctgaattactcaataaagactggagtcgctgctcctgagcaggtttctatt
tctgatgtccccaacacaaaatttttagatggaaatgccaagcacataacagttggggca
aaagatgacgtagcgtctactttaaagattggttcactcaccataaacccaaaaaaggct
gagcctaagcccttgccctcttctgcaattgctaataatgacattgtcacagtaggctca
gttcccatcaaagttaatggatttgccgaatctggtattctaacagttggtactattccg
cttgatcccaaagcacttaagcttgacaaggggggtgcttctgttaacattggatcccaa
cgttaa
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