Quercus lobata (valley oak): 115994536
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Entry
115994536 CDS
T07350
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115994536
Spliceosome [BR:
qlo03041
]
Common components
Common spliceosomal components
General mRNP proteins
115994536
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
115994536
NCBI-ProteinID:
XP_030974598
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All DBs
Position
6:complement(31244382..31253392)
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AA seq
590 aa
AA seq
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MDFDAYDYLEKTVVEEKEDRDSKKSKSKSKENSERSYRKREVDQEEPALPDGDDRRSKRS
RATADEENGSDKKEKDRDRDRDRDRERERERERSGHREKDRHHRDSDREKDRERERSSRE
KEKDKDKDKERDKEREKERRERDKEKERERERKERDHRKEKEEKERSRRSRSRSERDRDR
DRDRERERERDLEIRDTRRFKDKKEVVEPEADPERDQRTVFAYQMPLKANERDVYEFFSK
AGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGNLLLGQPVMVKPSEAEKNLV
QSTASTGGSSGLAGPYGAVDRKLYVGNLHFNMTESQLRAIFEPFGPVELVQLPLDLETGH
CKGFGFVQFAKLEDAKAAQSLNGKVEIAGRTIKVSSVTEHVGTQDTGAKSADFDDDDGGG
LSLNAQSRALLMQKLDRSGIATSIAESLGAPVVNGPAPNAQAMGLPINGQAAVSVPALPA
QALLTPAAEPVGTPSECLLLKNMFDPATETDPDFDMDIKDDVEEECSKYGRVKHIYVDRN
SAGCVYLRFETVEGAMGAQRAMHMRWFACRSISALYMQPHVYEAKFNVGA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgcttacgactacttggagaagacggtggtggaggagaaagaggaccga
gactccaagaagagcaagagtaagagcaaggagaacagtgagaggagttacaggaagaga
gaggttgatcaggaagaacctgctctacctgacggagatgaccgccggagcaagcgctcc
agagctaccgccgatgaagagaatggaagcgataagaaagaaaaagatcgcgaccgagac
agagacagagatcgagaacgagaacgagaacgagaacggtctggtcatcgcgagaaggat
cggcaccatagagattctgatagagaaaaggatcgcgagcgagagaggagtagtagagag
aaagagaaggataaggataaggacaaagagagagataaggagagagagaaggagaggagg
gagagagataaggagaaagagagggagagagagaggaaagagagggatcatagaaaggag
aaagaagagaaagaaaggtctcggagaagccggagccggtcggaacgggacagggaccgg
gaccgcgatagagagagagaaagagaaagagacttagagataagagacactaggagattt
aaagataagaaagaagtggtggagccggaagcagacccagaaagggatcagagaactgtt
tttgcataccagatgcctctcaaggcaaacgagagggacgtatatgaattcttctcaaaa
gcgggcaaggtgagggatgtccgactaatcatggacaggaattcaagaagatctaaagga
gttgggtatatagaattttatgatgcaatgtctgtgccaatggcaattgctctctctgga
aacctacttcttggacagcctgttatggttaaaccttctgaggctgaaaagaacctagtt
caatctactgcttctactgggggctcaagtggtcttgcaggtccatatggagcagttgat
agaaaactgtatgtgggcaacttgcactttaacatgactgaaagccaacttagagcgatt
tttgagccatttggtcctgtggagcttgttcaactgccccttgatcttgagacaggacac
tgcaagggttttgggtttgttcaatttgccaaacttgaagatgcaaaggcagcccaatct
ttgaatggaaaagtggaaattgctggtcgaactatcaaggtttcatcagttacagagcat
gttggaacacaagatactggagcaaaatcagcggactttgatgatgatgatgggggtggt
ttgtctctcaatgctcaatcaagagcactacttatgcagaagctggatcgctctggcatt
gctacaagtattgcggagtctcttggagctcctgtggtgaatgggccagctccaaatgca
caagccatgggcttgcctatcaatgggcaagctgcagtttctgtgccagctcttccagca
caagctctccttactccagctgcagaacctgttggaactcccagtgaatgcttactgttg
aagaatatgtttgatccagcaactgagacggatccagactttgatatggacattaaagat
gatgtggaagaagaatgttctaaatatggccgagtgaaacatatttatgtagatagaaat
agtgctggttgtgtgtatttgcggtttgaaactgtagagggtgcaatgggtgctcaacgt
gcaatgcatatgaggtggtttgcctgtaggtcgatttctgccttgtacatgcaaccccat
gtgtatgaagccaagtttaatgttggagcttga
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