Quercus lobata (valley oak): 115994729
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Entry
115994729 CDS
T07350
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115994729
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115994729
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115994729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-ANAPC11
zf-RING_16
Prok-RING_4
PHD
zf_RING_Vps8_fungal
RINGv
Motif
Other DBs
NCBI-GeneID:
115994729
NCBI-ProteinID:
XP_030974817
UniProt:
A0A7N2LZT4
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All DBs
Position
6:50808936..50813410
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AA seq
285 aa
AA seq
DB search
MWEALIGFFFVFVPYAIPRTSATVSIDSFSTSFPDLPAKSAVAVNRSGTCGALYVADPLE
ACSSLQNKGTEQTRLALIIRGGCSFEDKIRNAQNAGFRAAIVYNDQNDGSLVYMMIHPNN
ITVHASFVSKFAGEILKGYAEEGEVRCCLYPNHYESSWTVLTISFISFVVICAIAVFVYF
APRHWSSSQGTHFRSQRVDAEMVEALPCFTFSSAHPRDCLTEDTCAICLEDYKDGEILKV
LPCRHGFHSICMDSWLNKSGTFCPVCKHDLATKVAYSDVKKGIRV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaagcgttaatcggattcttcttcgtgttcgttccatacgcaatcccacgcacc
tctgctactgtttcgatcgattcgttttccacgtccttccccgaccttcccgccaaatct
gctgttgctgtcaataggtctggtacatgtggagcactgtatgtagcagatcctttggag
gcttgctcttcgcttcaaaacaaaggaactgagcaaacgagattggctttgataattagg
ggtggatgttctttcgaagataaaatccggaatgcacagaatgccggctttcgcgccgca
attgtttacaatgatcaaaacgatggaagcttggtttacatgatgatacacccgaacaac
attacagtgcatgcgagttttgtttctaagtttgctggtgaaatcttgaaggggtatgct
gaagagggagaagtcagatgctgtctatatccaaatcattatgaatcatcctggacggtg
ttgacaatatcttttatctcgtttgttgtcatatgtgcaatcgcggtgtttgtctacttt
gcacccagacattggtcgtcttcacaaggaacacattttcgctctcaaagagtagatgct
gagatggtggaagctctaccctgcttcacgttcagctctgctcatccgagggattgcctc
actgaagacacttgtgccatttgccttgaggattacaaagatggggaaattcttaaagtt
ctcccctgccgacatggatttcattcaatctgcatggactcatggttgaataagtcgggt
acattctgcccagtgtgcaagcatgatttggcaacgaaagttgcatattctgatgtgaag
aaaggaatcagggtatag
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