Quercus lobata (valley oak): 115994746
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Entry
115994746 CDS
T07350
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qlo03036
]
115994746
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115994746
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HARP
Motif
Other DBs
NCBI-GeneID:
115994746
NCBI-ProteinID:
XP_030974843
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Position
6:complement(14503725..14517670)
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AA seq
718 aa
AA seq
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MSLDDEEWEWDLSAEELDTLERDALLKFAAKPPPPPPPTPPPPSPSQQQQPHSSHFNNNN
HYFDRSPSNPIASSYSSNRVEQALPISPRSKVLPSSIPSKPNFDEPLSKPKASVKFFLHA
TGNIAAKFLYDQVLVAAFRKIPKASWNAKERLWIFPISSLSSAEKVLSEIPGYNVEVEDM
DPLVHRAIAAASAVPDLRDRYDRMPSFIESKLLPFQRDGVRFVLQHGGRVLLADEMGLGK
TLQAIAVSACIRDSWPVLILTPSSLRLHWASTIQQWLNIPPSDMLVVLSQCGGSNRAGYT
IVSSSTKGCIRLDGLFNIISYDVVPKLQNLLMASEFKVVIADESHFLKNAQAKRTTASVP
VIKKAKYAILLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGIFGIYQGASNH
EELHNLIKATVMIRRLKKDVLTELPVKRRQQVFLELAEKDMKQINALFCELEVVKGKIKA
CQSKEEVDSLKFNEKNLINKIYTSSAEAKIPAVLDYLGTVIEAGCKFLIFAHHQPMIDSI
YQFLLKKKVGCIRIDGSTPAASRQALVTDFQEKDATRAAVLSIKAGGVGLTLTAASTVIF
AELSWTPGDLIQAEDRAHRIGQVSAVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDGHE
KTLEVSSSQTSSSPLKQKVSSSQTSSSPLKQKTLDSYMKRCSNMDDLEHQPKLKHPRH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggatgatgaagagtgggagtgggacttgagtgcggaagaactcgatactctt
gaaagagacgctctcttgaaattcgccgctaaaccaccaccaccaccaccaccaacaccg
ccaccgccgtcaccgtcacagcaacaacaaccgcactcttcacatttcaacaacaataac
cactactttgatcgctccccctccaaccccattgcttcttcttattcctctaacagggtt
gaacaagctttgcctatatctcctcggtccaaagtattgccctcatcaatcccatctaaa
ccaaactttgatgaacctttgtcaaagcctaaggcatccgtcaaattttttcttcatgcc
accggaaacattgctgctaaatttttatatgaccaggtactagtagctgcgttccgcaaa
attcccaaagcttcttggaatgcaaaagaaaggttgtggatattcccgatatcttcttta
tcttcagcagaaaaagttcttagtgagatacctggttacaatgttgaggtggaggacatg
gatcctttggtgcatcgtgctattgctgctgcctctgctgttccagatcttcgagaccga
tatgacaggatgcctagctttattgaatctaagcttttgccttttcagcgagatggtgtt
aggtttgtgttgcagcatggagggcgtgttctcctagcagatgaaatgggattgggaaag
actttgcaggctattgctgtaagtgcatgcatccgtgattcatggcctgttcttattctt
accccatcttccttacggctgcattgggcttctacaattcagcaatggctgaatattcct
ccatcagatatgcttgttgttctgtctcaatgtggtggttcaaacagagccggatataca
atagtgtcatcaagtaccaagggctgcattcgtcttgatggcctattcaacatcatctcc
tatgatgtagtccctaagctacagaatctacttatggcatctgagtttaaggttgtgatt
gcagatgagtcacactttctcaaaaatgctcaagcaaagaggacaactgcttctgttcca
gtcataaagaaagctaaatatgcaatattgcttagtggaactccggctttatcccgacca
attgagctattcaagcagctggaagcattatatcctgatgtatataagaatgttcacgaa
tatggtaaccggtattgcaagggtggaatctttggaatttatcaaggtgcaagtaaccat
gaagaattgcacaatttgatcaaggcaactgtgatgatccgcagacttaaaaaggatgtt
cttactgagcttcctgtgaagcgtaggcaacaggtcttcctagaattggcagaaaaggac
atgaaacaaatcaatgctttattctgtgagttggaggtagtaaaaggaaaaattaaggcc
tgccaatcaaaagaagaggttgattcactcaaatttaatgagaagaatcttattaacaag
atatatactagttctgctgaagccaagattcctgcagttctagattacctaggaactgtc
atcgaggcaggatgtaagttccttatatttgcacaccaccagccaatgattgactcaata
tatcaatttcttcttaagaagaaagtgggttgcattcgtattgatggcagtactcctgca
gcttcaaggcaagctttggttacagattttcaggagaaagatgctactagggcagcagta
ctatctatcaaagctggaggtgttgggttaactttaacggctgcatccaccgttattttt
gcagagttgtcttggactccaggtgatctgattcaagctgaagatcgtgctcataggatt
ggtcaggtgtctgccgtcaatatctactacctgctagcaaatgacacagttgatgacatc
atttgggatgttgttcagagcaagttggaaaatttaggacagatgcttgatggccatgag
aaaaccttggaagtttcatccagccaaacaagcagcagccctttaaagcagaaagtttca
tccagccaaacaagcagcagccctttaaagcagaaaacactcgattcttatatgaagcgc
tgtagcaacatggatgacttggaacatcagcccaagctcaaacatcctcggcactga
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