Quercus lobata (valley oak): 115994772
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Entry
115994772 CDS
T07350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115994772
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
qlo01002
]
115994772
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115994772
Enzymes [BR:
qlo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115994772
Peptidases and inhibitors [BR:
qlo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115994772
Ubiquitin system [BR:
qlo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115994772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
115994772
NCBI-ProteinID:
XP_030974889
UniProt:
A0A7N2LZA6
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All DBs
Position
6:25003001..25010780
Genome browser
AA seq
1005 aa
AA seq
DB search
MGKKIKKKSRTPVKEKRVATHSTKTVTQDSDPSAKTVDEGILVVKERKPCVHLDKSVDLI
KLSAKMGSSEPIMCEDCRVDGKGTKGKGKHGKKKGGAAVDSKSDSRAMWVCLECGHYACG
GVGLPTGHQSHTVRHVRQTRHPLVMHFEKPQLCWCFPCNALIPVDKMEENDEHKDVLSNV
LKLIKGRSSEGSSADVEDVWFGGGSVTSEIKSGSSILSDLDGGGGYVVRGLVNLGNTCFF
NSIMQNLLAMCRLRDYFFNLDTSIGPLTVALKKLFIESKPEGGLKNVMNPRSFFGCICSK
APQFRGYQQHDSHEFLRCLLDGLSAEELGARKQSNSSEGDEISSNPGTFVDAVFGGQISS
TVCCVECGHSSTVYEPFLDLSLPVPTKKPLSKKSQPVSRAKKTKLPPKKGGRIQPKVIKA
ATLLPPQSVSTPSASNDMSCQAQSIEPVEEKMMASSCDSRPSDSSNLIVMAGEVGSASQN
KLAGQTFENEQVFENAVGQTSAELEDFTWMDFLEPGTVSDEHDLTSQNVDISVIKDAENK
DVYLNDIPLQGSSESSSQTCSLDTTPNSKPDSSANYCDKELPLQVQGNEVLLLPYKEETS
TTGEIMKGGAEASSSVMGCGQEELDFDGFGDMFNEPEVAVGPIIGPTLGNGVAETGFVAG
NSSESDPDEVDNSDSPVTIESCLAHFIKPELLSDENAWHCENCTRMLLHQRLKAKVQEKT
KSTILMNENETGSHKEQLHLDKDLSCPAEVENPNNGAIKCDASLNSSGESIVSYKEKMDC
LITENGQTGELNPAVSQLEDGTGEKKDALPEQSRSPGCYKTCSQENFFGQVTGSCSTECT
TSKVQQNESQLLAGNCESEGSEDEETDSKSVKVKRDATKRVLIYKAPPILTIHLKRFSQD
ARGRLSKLNGHVSFRETIDLGPYIDPRSIEEEKYHYRLLGIVEHLGTMRGGHYVSYVRAS
EKSRGKTEKENSGSIWYHASDAYVREASLDEVLRCEAYILFYEKI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaatcaagaagaagagccgaactcctgtaaaggagaaacgggttgcaacc
cattcgacgaaaacagttacccaagattctgacccaagtgctaagactgttgatgaagga
attttagtagtgaaagagagaaaaccatgtgtccatcttgacaagagtgttgatttgatt
aaattgtcagctaaaatggggtcttcagaacctattatgtgcgaagattgtagggttgat
gggaaggggactaagggaaaaggtaaacatgggaagaagaaaggtggggctgcagttgat
tcaaaatccgactccagagccatgtgggtttgtttggaatgtgggcattatgcatgtgga
ggggttggactcccaacaggccatcaaagccacacggttcggcatgttaggcagactcgt
catcctttggtaatgcattttgagaaaccacaactctgttggtgcttcccttgcaatgct
ctcattccagtggacaagatggaagagaatgatgaacataaagatgtcctgtcaaatgtt
ttgaagttgataaaggggcgatcctcagaagggtcctcggcagatgttgaggatgtttgg
tttgggggtggcagtgttacaagtgaaattaaatcaggaagcagcatattaagtgatttg
gacggaggtggtggttatgtagtaagaggattggttaatcttgggaatacttgcttcttc
aattcaataatgcaaaatcttctagctatgtgtagattgagggactattttttcaacttg
gatacctctattggacctcttactgttgctttaaagaagctttttattgaatccaaaccg
gagggaggactaaaaaatgtgatgaatccaagatcattttttggatgcatctgttccaag
gctccccaatttagggggtatcagcagcatgacagtcatgaatttctccgttgcttactt
gatggtttgtctgctgaggagttgggtgcaagaaaacagagtaattcttcagagggagat
gaaatttcatcaaatccaggtacttttgtggatgctgtatttgggggccaaatatctagt
actgtttgttgtgttgaatgtgggcattcttcaacagtgtatgagccttttttagatctc
tcccttccagttccaaccaaaaaacctctatccaaaaagtcccaaccagtctctagagca
aagaaaaccaagctgccacccaagaaaggtggaaggattcagccaaaagttattaaagct
gcaactttgttgccacctcaaagtgtttcaaccccatcagccagcaatgatatgtcctgt
caagcacagtccattgagcctgttgaagaaaagatgatggcttcttcatgcgattctaga
ccatcagattccagtaacctgattgttatggctggtgaagtgggttcagcttcacagaac
aagttagctggtcaaacatttgaaaatgagcaagtctttgagaatgctgtagggcaaaca
tcagctgagttggaagattttacatggatggatttccttgaaccaggaactgtatcggat
gaacatgatttgacatcacaaaatgttgatatttcagtaattaaagatgcagaaaacaag
gatgtatatctgaatgacataccattacagggtagctctgaatctagcagtcagacttgt
tcacttgatacaacaccaaattcaaaaccagattcttcagcaaattattgcgacaaggag
ctccccttacaggttcaaggtaatgaagttctattgcttccatataaagaagaaacttcc
actactggggagattatgaaaggaggagctgaggcctcctcgtcagtcatgggctgtgga
caagaggaattggactttgatggctttggtgatatgttcaatgagcctgaggttgctgtg
gggcccatcataggccccactttaggtaatggggtagcagaaactggttttgtggcagga
aacagcagtgagtcagatccagatgaagttgataattcggattctccggtaaccatagag
agttgtttggctcatttcataaaaccagagcttctttctgatgaaaatgcttggcattgt
gagaattgtacaagaatgctgctacaccagaggttgaaagcaaaggtacaggaaaaaacc
aagtcaacaattttgatgaatgaaaatgagactggaagccacaaggagcaactgcattta
gataaggacttatcctgtcctgctgaagttgaaaacccaaataatggagctatcaaatgt
gatgcttctcttaacagtagtggtgaaagcattgtttcatataaagaaaaaatggattgc
ttgataactgaaaatggtcaaacaggtgagctgaatccagctgtttctcagttggaagat
ggaacaggtgagaaaaaagatgcacttccagagcaatcacgctctccaggttgctataaa
acttgcagtcaagaaaatttctttggtcaagtcactggttcctgtagtacagaatgcacc
accagtaaagtccagcaaaatgaatcccagttgttggctgggaactgtgaatcagaggga
agtgaggatgaggagacagattccaagagtgtgaaggtgaagagagatgcaaccaaaagg
gtccttatttacaaggccccaccaattctcaccattcatcttaaaaggtttagccaagat
gctcgtggtcgattaagtaaattgaatggccatgtcagtttcagagaaacaattgatctt
ggaccatatattgatcccaggtccatagaagaagagaagtatcattaccgtctgcttggg
atagtggagcatttgggtaccatgagagggggacactatgtttcatatgtgagagcaagt
gagaagagcagaggaaagactgagaaagaaaatagcggttctatatggtatcatgctagt
gatgcgtatgtgcgtgaggcttcactggatgaagttcttcgttgtgaggcctacatctta
ttctatgaaaagatttga
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