Quercus lobata (valley oak): 115994779
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Entry
115994779 CDS
T07350
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qlo03041
]
115994779
Spliceosome [BR:
qlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115994779
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115994779
NCBI-ProteinID:
XP_030974899
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All DBs
Position
6:31235057..31241352
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AA seq
448 aa
AA seq
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MTDPSKVLHIRNVGYEITENDLLQLVQPFGVVTKSVMLRAKNQALIQMQDVASAVNVVQY
YTNLQPSVRERNVYIQFSSHQELTTVDQNTQGRSQDAQPNRILLVTIHQMQYPITVEVLH
QVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSALSAIDALQGRNIYDGCCQLDIQFSNLS
ELQVNYNNERSRDFTNPALPSEQKGRPSQSGYGDMGGMYGLQPPGARAVTYPQMGDAATI
AAAFGGRLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRSKPDHAL
IQMGDGFQAEFAVNFLKGALLFGKRLEVNYSKYPNITPGQDTHDYSNSNLNRFNRNAQKN
YRYCCSPTKMIHLSTLPQEITEEEIVAHLELEEHGTVVGTKLFEANGKKQALVLFETEEQ
ATEALVCKHATSIDGSIVRISFSQLQSL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccttcaaaagttcttcatatacgaaatgtgggttatgaaataaccgagaat
gatttgctccagctggttcagccatttggggttgtcactaaatcagtgatgctacgtgct
aagaaccaggctcttatccagatgcaggatgtagcatctgctgtcaatgtagtgcaatac
tacacgaatcttcagcctagtgttcgggagagaaatgtttacattcagttctcttcgcat
caagaactgactacagtggatcagaacactcaaggacgcagccaggatgcgcagcctaat
cgaattctcttagttacaattcatcaaatgcaatatccaataacagtggaagtgcttcac
caagtgttttctccttatggttttgtggagaagattgtcacatttcagaagtcagctggt
tttcaagcccttatccagtatcagtcacgccagagtgctctttctgcaatagatgcactt
cagggacgaaatatatatgatggctgctgtcagctagatattcagttttcaaacctttct
gagctacaagtgaactacaataatgagcgctccagggatttcacaaacccagctctacct
tcagaacagaaaggcagaccctcacaatctggatatggtgatatggggggcatgtatggt
cttcaacctcctggagctagggcagtaacatatccacagatgggagatgctgcaaccatc
gcagctgcctttggtgggcgcctgcctcctggtataagtggcacaaatgataggtgcact
gtcttggtgtctaatctaaatcctgataaaattgatgaggacaagttattcaatctattt
tccctctatggaaacattgtgaggatcaagcttctccgtagtaaaccggaccatgccctc
attcaaatgggagatggattccaggctgagtttgctgtaaacttcttgaagggagcactg
ctatttgggaaacgtttggaagtaaactactccaagtatccgaacataacaccaggccag
gacacacatgattactcaaattcaaaccttaaccgctttaaccgtaatgctcagaaaaac
taccgttattgctgttcaccaacgaagatgatccacttgtccaccctccctcaggaaatt
acagaggaagaaatagtggcccatctggagctggaggagcatgggactgttgtaggcacc
aaactcttcgaggcaaatgggaagaagcaagccttagtcctgtttgagactgaagagcaa
gctactgaggcacttgtctgcaagcatgcaacttccattgatggatcaattgtccgaatc
tccttctcccaattgcagtccctttag
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