Quercus lobata (valley oak): 115994831
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Entry
115994831 CDS
T07350
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115994831
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115994831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR54
DUF4221
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_IFT122_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
115994831
NCBI-ProteinID:
XP_030974968
UniProt:
A0A7N2LWV9
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Position
6:complement(6604829..6615251)
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AA seq
470 aa
AA seq
DB search
MMSRFVKDTSSCGGEGSAKGSSASEGPSQPSNHLDHEIAHLTKLGSEPHKLLTRTAPGRS
KLPISTVKMLVARETNHSGRGRFSSADGCHVLSRYLPTTGPCRVDQMNSRAYTSQFSADG
SLFVAGFQGSHIRIYNVNKGWKVQKDILAKSLRWTITDTSLSPDQQYLVYASMSPMVHIV
NVGSAATESVANITEIHDGLDFSVDDINDEFGIFSVKYSNDGRELVAASSNNSIYVYDLE
AKRLSLQIPAHMSDVNTVCFADETGHLLYSGSDDNLCKVWDRRCFITKGQAAGVLMGHLQ
GITFLDSRGDGRYLISNGKDQTTKLWDIRKMSSTVIYPKTRDADWDYRWMEYPQKARKLR
HPRDQSLATYRGHSVLRTLIRCYFSPTYSTGQKYIYTGSSDSSVYIYDLVSGAQVARLDY
HDAPVRDCNWHPVYPMIISSSWDGDIVKWEFPGSDESPPIKRRKRRRKNY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaggtttgtcaaggataccagcagttgtggtggtgagggttccgccaaagga
tcttctgctagtgaaggacctagtcaaccatcaaatcaccttgatcatgaaattgcccat
ctcacaaaacttgggtctgagccccacaaacttttgacccgcactgcacctgggaggtcg
aagttgcccatttcaacggttaaaatgttggttgctcgtgaaactaaccactcaggtcga
gggaggttttcatcggctgatggttgtcatgtattaagtcggtatttacccaccactgga
ccttgcagggtggaccagatgaacagccgtgcttatacttctcaattttcagctgatggt
tctctttttgttgctggatttcagggaagtcacattaggatatataatgtgaacaaggga
tggaaagttcagaaggacattctagcgaaaagcttgagatggaccattacagatacatct
ctgtcaccagatcagcaataccttgtctatgctagtatgtcaccaatggtacatattgtt
aatgttggatctgctgcaacagagtcagttgcaaacataacggaaattcatgatggtttg
gatttttctgttgatgacattaatgatgaatttgggattttctctgtaaaatattcaaat
gatgggcgagagcttgtagctgcaagtagcaataattcaatatatgtttatgaccttgag
gcaaaaaggcttagccttcaaattccagcacatatgtctgatgttaacacagtatgcttt
gccgatgaaactggccatctcttatattctggaagtgatgataatctctgtaaggtgtgg
gacaggcgctgctttatcacgaaaggacaagcagctggtgtcttgatgggacatcttcaa
ggcataacattccttgacagtcgtggagatgggcgttatcttatttcaaatggaaaagac
cagaccactaaactctgggatataagaaaaatgtcctctactgttatttatccaaaaact
agagatgctgactgggattacagatggatggagtaccctcaaaaagcaagaaaattgcgg
catcctcgtgatcagtcattggctacatatagaggccattcagtcttacgtactctaatt
cgttgttacttctctcccacatatagcactggtcagaagtatatctacactggatctagt
gattcctctgtttatatatatgatctggtgagtggagctcaagttgcaagactcgactat
catgatgcacctgtaagagattgtaattggcatcctgtctaccctatgatcatcagctct
tcttgggatggtgacattgtcaaatgggagtttcctggaagcgacgaatcccccccgatc
aagcgtaggaagaggcgacggaaaaactattag
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