Quercus lobata (valley oak): 115994887
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Entry
115994887 CDS
T07350
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04142
Lysosome biogenesis
qlo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
115994887
04148 Efferocytosis
115994887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qlo04131
]
115994887
Membrane trafficking [BR:
qlo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115994887
Hops complex
115994887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
VPS18_solenoid_2nd
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
zf_RING_Vps8_fungal
zf-C3HC4_2
Beta-prop_EML
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115994887
NCBI-ProteinID:
XP_030975062
UniProt:
A0A7N2M131
LinkDB
All DBs
Position
6:53008612..53012690
Genome browser
AA seq
962 aa
AA seq
DB search
MYQWRKFEFFEEKNAGKLNKISPPSSSEEENSAAVKIECCSSGRGKVVIGYGDGTISLLD
RGLNFNFSFHAHSSSVLFLQHLKQRNFLVTIGEDEQISPQQSSMCLKVFDLDKMHQPEAT
STSTSSTTPDCIGILRIFTNQFPQAKITSFLVLEEVPPILLIAIGLDNGCIYCIKGDIGR
ERITRFRLEVDDNRSSSNSITGLGFRVDGQALQLFAVTPVSVTLFSLQDQPPRQQTLDHI
GSSVYSVTMSDRLELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRN
GKHTFNVYDLKNRLIAHSIVVKEVTHMLCEWGNIILIMADKSALCIGEKDMESKLDMLFK
KNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYINTIGHLEPSYVIQK
FLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNKFIKSEDGVGEQKFD
VETAIRVCRAANYHEHAMYVAKKTGRHELYLKILLEDLGRYDEALHYISGLEPSQAGVTV
KEYGKILIEHKPVDTIEILMRLCTEDKESVKRGASSAYISMLPSPIDFLNIFIHHPESLM
DFLEKYTTKVKDSPAQVEIHNTLLELYLSNDLNFPSISQANNNEDLNLRAVGKLVADGKN
SAKETDCLERRDKGLRLLKGAWPSELEHPLYDVDLAIILCEMNAFSEGLLYLYEKMKLYK
EVIACYMQAHDHEGLIGCCKRLGDSVKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIE
RDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQEDTLAMRKE
VQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVLE
MKRSLEQNSRDQDQFFQQVKSSKDGFSVIAEYFGKGIISKTSNGSTGAGALGSANTSSGS
GL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgaattcttcgaggagaaaaacgccgggaaattgaacaaa
atatcgccgccgtcttcgtcagaggaagagaattcggccgccgtcaaaatcgaatgctgc
tcaagcggaagaggcaaggtagtgatcggctacggcgacggcacaatcagcctcctcgat
cgcggcctcaacttcaatttctccttccacgctcactcttcctccgtcctctttctccaa
cacctcaagcaacggaactttctagtgacgatcggagaagatgaacaaatttcgccgcaa
caatcctcaatgtgtctcaaggttttcgatctcgacaaaatgcatcagccagaggccaca
agcacaagcacaagctccaccactccagattgtattggaatcttacgtattttcactaat
cagttccctcaagccaagattacttcgtttttagtgctagaggaagtgccgccgattttg
cttatagctattggattagataatggttgtatctactgtatcaaaggtgacattggacgt
gagcgtataactcgttttaggcttgaagttgatgataaccggtcgtcatcaaattcgata
actggtctaggtttcagagtggatggtcaagcactccaattatttgctgttactccggtt
tcggttaccttgtttagtttgcaggatcaaccgcctagacaacaaaccctagatcatatt
ggatctagtgtttatagtgttacaatgagtgaccgcttggagttgataattggtcggcca
gaagcagtgtatttttacgaagtggatgggcgtggtccgtgttgggcttttgaaggagag
aagaaattcttggggtggttccgtggttatctattatgtgtgattgcagatcagagaaat
ggtaagcatacgttcaatgtttatgacttgaagaaccgtttgattgcacatagtatagtg
gttaaagaggttactcatatgctttgtgaatggggtaatatcatacttataatggctgac
aaatcagctttgtgtatcggggagaaagatatggaaagcaagttagatatgctgtttaag
aaaaacctttatactgtggctataaaccttgttcaaagccagcaagctgatgcagcagca
actgcagaggtgttaagaaagtatggggatcatttgtatagcaagcaagactatgatgag
gctatggcccaatatattaatactatcggtcatcttgaaccttcttatgtgatacagaag
ttcttagatgcacagagaatctacaaccttaccaactacttggagaagttacatgagaag
gggcttgcttctaaagaccatacaactttgctcttgaattgttacacgaaattgaaagat
gttgaaaagctaaataaattcattaaaagtgaggacggtgttggagagcagaagtttgat
gtggaaactgcaataagggtttgccgtgctgctaattatcatgagcatgcaatgtatgtt
gcaaagaagacagggaggcacgaattgtacttaaagatcttacttgaagaccttggtaga
tatgatgaagccttgcactatatttcaggccttgagccaagtcaagcaggggtgacggtg
aaggagtatggtaagattctcatagagcacaagccagtggatacaattgagatactcatg
agactttgcacagaggataaagaatcagtcaagcgaggagcttcaagtgcatacatatct
atgttgccatctcctattgattttctcaacattttcatccatcatccagaatcccttatg
gattttcttgaaaaatatactaccaaggtaaaagactcacctgctcaagttgaaatccac
aacacactgttggagttatacttgtccaatgacttgaactttccatccatctcacaagct
aacaacaatgaagatcttaatcttagagctgttgggaaattggttgctgatggcaaaaat
tcagctaaggaaacagattgtttggaaaggcgtgacaagggcctgcgtttgcttaagggt
gcatggccatctgagctagaacatccactttatgatgttgatttagctatcattctttgt
gaaatgaatgcatttagtgaagggctgttgtacttatatgaaaagatgaaactctacaaa
gaggtgattgcttgctatatgcaggcacatgaccatgagggattaattggatgctgcaaa
aggttgggggattcagttaaaggaggggacccatctctttgggctgatctgctgaagtat
tttggtgaacttggagaagattgctctaaagaagtgaaggaagttttgacctatattgaa
agggatgacatcttgcctcctatcattgttcttcaaacgttgtccagaaatccatgcctc
acactctctgtcattaaggattatattgctcgaaagcttgaacaagaatcaaagcttatt
gaagaggaccggcgagctattgagaagtatcaggaagacactctggcaatgagaaaagaa
gttcaggatctcaggacaaatgccagaatatttcagcttagcaagtgcactgcatgcact
ttcacacttgatctccctgctgtacattttatgtgtatgcactctttccatcagcgttgc
cttggggataatgaaaaagaatgtcctgagtgtgctcctgaatatagatctgttctggaa
atgaagagaagcttggagcagaattctagagaccaggatcagttctttcagcaagtgaag
agttcaaaggatggattttctgtgattgctgagtattttggaaagggaatcataagcaaa
acaagtaatggatccacaggtgcaggtgctcttggatcagccaacacttcttccggcagt
ggcctctaa
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