Quercus lobata (valley oak): 115994954
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Entry
115994954 CDS
T07350
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03082
ATP-dependent chromatin remodeling
qlo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115994954
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115994954
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qlo01009
]
115994954
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115994954
03036 Chromosome and associated proteins [BR:
qlo03036
]
115994954
Protein phosphatases and associated proteins [BR:
qlo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115994954
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115994954
SWI/SNF complex
115994954
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115994954
PBAF complex
115994954
SWI/SNF complex
115994954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
115994954
NCBI-ProteinID:
XP_030975168
UniProt:
A0A7N2LXF7
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All DBs
Position
6:complement(14720160..14725756)
Genome browser
AA seq
240 aa
AA seq
DB search
MKAPALSFSKAPVKFRMPTSANLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
KDLKLPPAFIAQIASSIQTQLAEFRSYEGQDMYSGEKIVPIKLDLRVNHTLIKDQFLWDM
NNFESDPEEFARTFCKDLGIEDPEVGPAIAFAIREQLYEIATQSVASARESRISKKGRRG
TEHATSSKSSGSALDLVKLFGYRSSVVRKRKDWDVYEPIVDHLSNEEVDALEAREDRNIR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaccggcgttgtctttctctaaagctcccgtcaagttcaggatgccaacttcg
gcgaatttggtaccgattcgattggacattgaaattgacggccagagattcaaagatgct
tttacttggaacccttctgaccccgattcagaggtcgtggtgtttgcgaaaaggacagtc
aaagatttgaagctccctccagcattcatagcacagattgcttcatccattcaaacacag
ctagcagagtttcgatcgtatgaaggacaggatatgtactctggggagaagatagttcca
attaagcttgatcttcgagttaatcatactcttataaaggaccagtttttgtgggacatg
aacaactttgagagtgatcctgaagagtttgctagaaccttctgcaaagatctgggcatt
gaagaccctgaagttggacctgcaattgcctttgcaatcagagaacagctttatgagatt
gcaactcaaagtgtagcttcagcaagagaaagcagaataagcaaaaagggtcgccggggg
actgaacatgctacatccagtaaatcaagtggttctgcattggacctggtgaagctattt
ggttacagatctagcgtggtccggaaaagaaaggactgggatgtatatgaacccatcgtt
gatcatctatctaatgaggaagtggatgcccttgaagcaagagaagataggaatattcgg
tga
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integrated database retrieval system
