Quercus lobata (valley oak): 115994984
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Entry
115994984 CDS
T07350
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00040
Pentose and glucuronate interconversions
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115994984
Enzymes [BR:
qlo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115994984
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
115994984
NCBI-ProteinID:
XP_030975224
UniProt:
A0A7N2LXC6
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Position
6:complement(23254339..23259593)
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AA seq
447 aa
AA seq
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MAVSMKWVGLCLMVVLVLFVGTIAKVRNDQISETSNVEVVREQVQSSSNSTMASSLEKVE
GKKEHAVDDPEEIASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDPNWHKNRKRLAD
CGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPRPGTLRHAVIQEEPLWIVFKRDMVIKLKQ
ELIMNSFKTIDGRGVNVHIANGACITIQYVTNIIVHGLHIHDCKPTGNALVRSSPSHYGW
RTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTSITISNNHFTHHNEVMLLGHS
DSYVRDKQMQVTIAYNHFGEGLMQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQ
GNRYAAPTNPFAKEVTKRVETAASQWKGWNWRSEGDMMLNGAYFTPSGAGASASYARASS
LGAKSSSMVGSITSGSGALPCRRGHQC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtctatgaaatgggttggtctttgtttgatggttgtgttggtattgttcgtt
gggacaatagcgaaggtacggaacgaccagatctcggaaactagcaatgtggaagtggta
agagaacaagtgcaaagctcaagcaattcaacaatggcgtcgagtttggaaaaagttgag
ggcaagaaggagcatgcagtggatgacccagaagagattgcttcaatggttgacatgagc
atccgcaacagtactgaaagaaggaagctaggcttcttctcatgtggaactggtaatccc
attgatgactgctggcgttgtgacccaaactggcacaaaaaccgcaagcgccttgcagac
tgcggcattggatttggcagaaacgccattggtggccgcgatggacgcttctatgtcgtg
actgaccccggtgatgatgaccctgtgaaccccaggcctggcacattgcgccatgctgtt
atccaggaagagcctctgtggattgtgttcaagagggacatggtgattaaattgaagcag
gagcttatcatgaacagctttaagaccattgatggtcgtggggtcaatgtccacattgct
aatggtgcttgcatcactatccagtatgtcactaatattatcgttcatggtttacacatc
catgactgtaagcctactggcaatgccttggtgaggagctctccaagtcattatgggtgg
aggactatggctgatggcgatgctgtttccatttttggttcaagtcacatatgggttgat
cacaattctctctctaattgtgctgatggccttgttgacgctgtcatgggctcaacttca
attaccatttccaacaaccatttcacccaccacaatgaggtgatgctgttgggccatagt
gattcttacgtacgagacaagcaaatgcaagtgaccatcgcatacaaccattttggagag
gggcttatgcagagaatgcctaggtgtagacatgggtacttccatgttgtgaacaatgac
tacactcactgggagatgtatgccattggtggaagtgcaagtcctaccatcaatagccag
ggcaacagatatgcagcaccaacaaacccttttgcaaaagaggtgactaagagggtcgaa
accgctgcaagccagtggaagggctggaattggaggtcagagggagatatgatgttgaat
ggtgcctatttcactccatcaggagctggagcttcagccagttatgctagggcctcaagc
ttgggagccaagtcttcttctatggttggctccattacttccggttctggtgcacttccc
tgccgtagaggccaccagtgctag
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