Quercus lobata (valley oak): 115995012
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Entry
115995012 CDS
T07350
Name
(RefSeq) transcription factor SPATULA isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115995012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115995012
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115995012
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
CENPU
Motif
Other DBs
NCBI-GeneID:
115995012
NCBI-ProteinID:
XP_030975267
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Position
6:40946356..40950847
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AA seq
402 aa
AA seq
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MGDMYEYDKKSSCSSSTSAPQPHLQQLPSTSASAPDEISLFLHQILLRSSPSSSSSLMAN
AVKQGTSNVNPDRTCRSALLQDGISAVESLSGISAGSGGVFLSNVSTSSLGGASENETDE
YDCESEEGLEALVEDVPDKPVYPRGSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPN
SNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCLPGALQPIQFPQMRMDFGEEY
RPLHLDMTGTNPLNKETPLHDAFTLPNQCTASNQPSVSNMSNIINSETSFGPIQAPLGPF
QLHTSSEDLCREDILQHQQSIVNHPDTNPVEIDMGAPASVSLPFNTQASNLKDSGSLQTC
ISGRERSEGLLLRNIEHNLILTPHLSMNTGRSASNDDAKMEK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggggatatgtacgagtatgacaaaaagtcttcctgttcatcttcaacttcagctcct
cagcctcatcttcagcagcttccttcaacttctgcaagtgctccagatgaaatctcgctt
tttcttcatcaaatccttcttcgttcatctccttcttcttcatcttctctcatggccaac
gcagttaaacaagggacatcgaatgtaaatcctgaccgtacttgccgatcagctcttctc
caagatgggatctcggccgttgagtctctaagtggtatcagcgctggctctggtggtgtt
ttcctctccaatgtgtcaacctcttcacttggaggagcgagtgagaatgagactgatgag
tatgattgtgaaagcgaggagggtcttgaagcgttggtggaagatgtgcctgacaaacca
gtttatcctcgtggttcatcaaagagaagcagagctgcagaagttcataatttgtctgaa
aagaggaggaggagcaggattaatgagaaaatgaaggcattgcaaaatctgattccaaat
tctaataagacagataaggcttcgatgcttgatgaagctattgaatacctaaagcagctt
cagctccaagtacagatgttatcaatgagaaacgggttgagtttgcatcctatgtgctta
ccaggagcactgcagcccatccagttcccccagatgagaatggactttggtgaggaatat
aggcccctgcatttggacatgacaggcacaaatcctttgaacaaagaaaccccattgcat
gatgcattcactctacccaaccaatgcactgcatcaaaccagccatcagtatctaatatg
tcaaatataataaattcagaaacctcatttgggcctattcaggctcctttaggacccttt
caactgcacacctcatctgaggatctttgcagggaagacattttgcagcatcagcaatca
attgtgaaccatcccgataccaatccagtagaaattgacatgggagccccagcatcagta
tcacttccctttaatacacaagcatctaatctaaaggacagtggctctctccaaacatgc
atttcgggaagagagcggtcagaaggtttgcttctaaggaatatagagcacaaccttata
cttacaccacatttgagcatgaacacaggaagaagtgcctccaatgacgatgcgaagatg
gaaaaatga
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