KEGG   Quercus lobata (valley oak): 115995191
Entry
115995191         CDS       T07350                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein ADP-ribosyltransferase PARP3
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115995191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115995191
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115995191
SSDB
Motif
Pfam: PARP RVT_2 PARP_reg PADR1_N Zn_ribbon_PADR1 BRCT WGR BRCT_2 WDR72_alpha-sol BRCT_3
Other DBs
NCBI-GeneID: 115995191
NCBI-ProteinID: XP_030975515
LinkDB
Position
1:12491682..12512459
AA seq 1279 aa
MCIAAIKGWPLHQLDVNNAFIHGDLEEEVYMSLPQGYHSKGGCSTDARPFVCKLRKSLYG
LKQASRQWHAKLSTTITEMGFVQSKSDYALFVHSKGSNFTALLVYVDDILITSNDAQCVA
DLKELLDAKFGIKDLGTLKYFLGLEVARSDKGITLNQRKYALEVLTDSGMIGCKPMKTPM
EQHLRLSKDEGELIDDPSQYRRLIGRLIYLTLTRPNICYAVNRLSQFLSKPRHPHMVAAL
RVLQYIKGAPGQGLFFSANSDFQLKAFCDADWAGCPDTRRSLTGYCIFLDFKIEHSKAAL
LYCDNKAALHIAANTVFHERTKHIEVDCHLVREKIQAGMIKTFHVRTNLQLADVFTKALG
APAFLDLISRLGLLNIFSPNITYSQPWQDSEAISTAEAALVLRGAVKKINQKSKPEAVVN
KGRLTRVRKTKEQKKKRGLNDSNISILLRKLLVALKGVHETRSHARASGEEEKVMTRKQK
AESKEHEAEQSPKKPKSENENGQPNGKDAAEIAAEFEEFCKAIKEHLXYQQMREILEANG
EDSSGPDSAIVSKCQDLLFYGVLEKCSLFCNGNLEYTGTRYSCYSCRGFYSEWSSCTFNT
KDPPRKQEPIKLPDXILNSPVSDLLKKYQDPSRRPHRDLVTTDKPFTXMMISLMGRLSXT
NDYWRKEIEKHGGKVANKVIGATCLVVSPAERERGGTSKLVEAMERGIRVVSEAWLADSV
HKKEAQPFEAFDVVSDLSVDGKGIPWDKQDPSDEALESLSAELKLYGKRGVYKDSILQEQ
GGEIFQKDGILYNCASSLCVLGRGLNDYCVMQPITVPERGLHLYYKKDRVGNDPNAEERL
KQWEDVENAVKEFVRLFEEITRNEFEPWEREKKFQKKPLKFFPIDMDDGIEVRHGGLALR
QLGVAVTHCKLEPLLANFMKVLCSQGIYKYVLMEIGHDPPDLPIGMVTDFHLKRCEEVLL
EFIEKVKSMKETGLKAEAVWSDFSQRWFTLMHSTRSFIFRDFQELADSAAAALETVRDIT
VASHLIEDMSASTIDDPLSDRYKKLGCSIXALDKDSDDYKMILNYLQKTYEPVKVGDIEY
GVSVDNIFAVETNAHSSYDEIKKLPNKVLLWCVVYKFFFTGTRTSNLLRHLHKGYLPSIC
HLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGDQITEPKSPPENTKS
LEDKKLGVKGLGRKKTDESEHFAWKDDIKVPCGRLVPSEHNDXPLEYNEYATYDPKQVSI
RFLVGVKYEEKGAVMETKE
NT seq 3840 nt   +upstreamnt  +downstreamnt
atgtgtattgctgctatcaagggttggcctttacatcagttggatgttaataatgccttc
atccatggtgatttagaggaggaagtgtacatgtccttaccacagggctatcacagcaag
gggggctgttcaacagatgctagaccttttgtatgcaagttgagaaagtcactttatgga
ttgaagcaggccagcaggcagtggcatgctaaactatccacaacaatcactgaaatgggt
tttgttcaatcaaaatctgattatgccctatttgtacattcaaagggctctaattttact
gcccttttggtctatgtagatgacatattgatcacaagtaatgatgctcaatgtgtagca
gatttaaaagaactcttggatgctaagtttgggataaaagacttaggaaccttgaagtat
tttctggggttagaagtggcaaggagtgacaagggcattactcttaatcagagaaaatat
gccttagaagtgttgacagattcaggtatgataggctgcaagcctatgaaaactcctatg
gagcagcaccttagattgtcaaaggatgaaggagagttaattgatgatccttcacagtac
agaaggcttataggtaggttgatttatttaaccttgacaagaccaaacatttgttatgca
gtgaataggctaagtcaatttttgagcaagcctaggcatcctcacatggtggcagcacta
agggttttacaatacatcaagggtgctccagggcaggggttgtttttctcagccaactca
gattttcaattgaaggcattttgtgatgcggactgggcaggatgccctgacactaggaga
tctttgacaggatattgcattttccttgacttcaagattgagcactccaaggctgcacta
ctctactgtgacaacaaggcagccttgcacatagctgcaaacacagtgttccatgagaga
acaaaacatatagaagtagattgtcatttagtcagggaaaaaatacaggcaggtatgatt
aagactttccatgtcaggaccaatttacaactggctgatgtgtttactaaagcacttggt
gcacctgcattcttggatttgattagtagattaggattactcaacattttcagtcccaac
attacttattcacaaccatggcaagactcagaagctatttccacagcagaagcagctctg
gtcttgaggggggctgttaagaagatcaaccaaaagagtaaacctgaagcagtggtgaat
aaaggaagactgactcgtgtaagaaagactaaagagcaaaagaagaaaaggggattaaac
gacagtaacattagtatattactgagaaagctacttgtagcattaaaaggagttcacgag
acaaggtctcatgctcgtgcgtctggtgaggaagaaaaggtgatgacaaggaagcagaag
gcagagagcaaagaacatgaagcagagcaatctccaaagaagcccaagtctgaaaatgaa
aacggccagcctaatggaaaagatgcggccgagatagctgccgagtttgaagaattctgt
aaagccattaaagagcatctcntctatcaacaaatgcgtgaaatactggaagctaatggc
gaagactcctccggccctgatagtgctattgtctctaaatgccaagatttgctgttttat
ggggtgttggagaaatgctcacttttttgcaatggcaatttggagtacacgggtacacgc
tattcttgctattcttgcagaggattttatagtgagtggtcttcttgcaccttcaacacc
aaggatcctccaaggaaacaagaaccaatcaaattaccagatnttattctcaattctcct
gtttcagatttactaaagaagtatcaggatccaagtcgccggcctcacagggatttagtc
accacagataaaccttttacatgaatgatgatctctctgatgggccgtctttcttgaaca
aatgattattggagaaaagagattgaaaaacatggaggaaaagttgccaacaaagtcata
ggtgcgacttgtctggttgtttctccagctgagagagagcgtggtggcacgtctaaactt
gtggaagcaatggagagaggcattcgtgtagtgagtgaagcttggttggcagatagtgtt
cacaaaaaagaagcccaaccctttgaagcttttgatgttgtcagtgatctctcggtagat
gggaaaggaattccatgggataaacaagatcctagtgacgaggcacttgaatcactctca
gcagaactaaagctttatggtaagagaggagtatacaaggattccatattgcaggagcaa
ggcggagagatattccaaaaagatgggatactgtataattgtgcctcttctctttgcgtc
ttagggcgtggactgaatgactattgtgtgatgcaaccgatcacagtgccagagcgtggc
ttgcatctgtactataagaaagatagagtgggtaatgatccaaacgcagaggagaggctc
aaacagtgggaagatgtggaaaatgctgtgaaagagtttgtgaggctctttgaggaaata
actagaaatgaatttgagccctgggaaagagagaagaaattccagaagaagccactgaaa
ttttttccaatagacatggatgatggaattgaagtgagacatggaggtcttgcacttcgg
cagctaggagttgcagtcacacactgcaaacttgagcctttgcttgccaatttcatgaag
gttttgtgcagtcaggggatatacaagtatgttctgatggagatcggacatgacccccca
gacctaccaatagggatggtcactgattttcacttgaaacgatgtgaggaggttctccta
gagttcattgaaaaggtgaaatcaatgaaagagactgggctgaaggctgaggctgtttgg
tcagattttagccaaagatggtttactctgatgcactccactagatctttcatctttcgg
gactttcaagaacttgcagacagtgctgcagctgcactagaaactgttcgagacataact
gtggcttcacaccttatagaagacatgagtgcctcaaccattgatgatccattgtctgat
cgatacaagaaactgggatgctcaattntcgcccttgataaagattctgatgactacaaa
atgatcctgaactatctgcagaaaacttatgaacctgtcaaagttggagatattgaatat
ggtgtgtccgttgataacatatttgctgtggaaacaaatgcgcactcttcttatgatgaa
ataaagaagttaccaaacaaagtccttttatggtgtgttgtatacaaatttttctttact
ggcacccgcacctcaaatttattgaggcacttgcataaaggatacttgccatcaatatgt
catcttcctgtcccgggttacatgtttggcagggcaatagtttgttctgatgctgcagca
gaagctgctagatatgggttcactgcagtagacaggccagaagggttcttggtcctcgca
attgcttctctaggagatcaaattactgagccaaagagtccacctgagaataccaagtcc
ttggaagacaagaagcttggggtgaaggggctgggtcgaaagaagactgatgaatcagaa
cactttgcttggaaagatgatataaaagtaccttgtggtcgcttggttccctcagagcac
aatgatnagccccttgaatacaatgagtatgctacttatgatcctaaacaggtgagcata
aggttcttggtgggagtgaagtatgaagagaagggtgcggtgatggagactaaggagtga

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