Quercus lobata (valley oak): 115995215
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Entry
115995215 CDS
T07350
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115995215
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
qlo01007
]
115995215
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115995215
Enzymes [BR:
qlo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
115995215
Amino acid related enzymes [BR:
qlo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
115995215
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115995215
Prokaryotic type
Other AARSs
115995215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
115995215
NCBI-ProteinID:
XP_030975546
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Position
6:complement(41071285..41083356)
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AA seq
643 aa
AA seq
DB search
MEDLGSVTGSPAAGETLSKNALKKELKNKQKEEERRRKEEEKAKQAASMADSRSNKSAAA
DDEDMDPTQYYENRLKHVASLRAAGEEPYPHKFHITTSIPEYVEQYKNIGNGEHLEDVTV
NLAGRIMSKRSSSSKLFFYDLHGCDAKVQVMADASKSNLNAEEFSRFHSTVKRGDIVGVE
GFPGKTKRGELSIFPRSFIVLTPCLRMIPRQKPKAGSVSNNANLKEEEAWVPGRARNPET
YILKDQETRYRQRYLDLMLNMEVRQIFKTRTRIIKYIERFLDNRDFWEVETPMMNTIAGG
AAARPFVTHHNDLNTNLFMRIAPELSLKQLLVGEFGRVYEIGKQFRNEGIDLTHNPEFTT
CEFYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGLDEDPIEIDFTPPFRRIDMI
EELEKMANLNIPKDFSSDEANKYLKDACTKYEIKCAPPETTARLLDKLVGHFLEETCTDP
AFIINHPELMSPLAKWHRTKKGLTERFELFINKHELCNAYTELNDPVVQRQQFAEQLKDR
QSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVILFPAMKPQDEP
SAKEGDAGTSNARAVIRTCKLLLKICMVLWLLTDCYRFLRKHF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttggggtcggtgacaggctcccctgctgctggggaaactctcagcaaaaat
gcactcaagaaggaattgaagaataagcaaaaggaagaagaaaggcggcgcaaagaggag
gagaaggcaaaacaggctgcttctatggcagattcccgcagcaataaatctgcagcagct
gacgatgaagatatggatccaacgcaatactacgaaaatagactgaaacatgttgcctct
ctgagggcagctggtgaagagccatatcctcacaaattccatattacaacgtctatccct
gaatatgtagagcagtataaaaacataggcaatggggagcatcttgaggatgttactgta
aatttggctgggcgtatcatgagcaaacgttcatcttcttcaaagctattcttttatgat
ttacatggttgtgatgctaaagtccaagttatggccgatgctagcaagtcaaatttgaat
gcggaagaattttctaggttccattcaactgtgaagcgtggtgatattgttggtgtcgag
gggtttccagggaaaactaaaaggggggagctaagtatttttccaagatcgtttatagtc
ttaaccccttgtctccgtatgataccaaggcaaaagcctaaggctggttctgtgtctaac
aatgccaatttgaaggaagaggaggcttgggtcccaggacgtgccaggaatcctgaaaca
tatattttgaaagaccaggaaactcgttatcgacaacgctatttagatttgatgttgaat
atggaggttcgacaaatttttaagacaagaactaggatcattaaatatattgagcgcttt
cttgacaatcgtgatttctgggaggttgaaacaccaatgatgaatacgattgctggtgga
gcagctgcccgtccatttgtgacccatcacaatgacctgaacacgaatctattcatgcgc
attgcgcctgagctctctctgaagcagcttcttgttggtgaatttggccgtgtttatgag
attggaaagcagttcagaaatgagggcatcgatttgacacataatcctgagttcaccacc
tgtgagttctatatggcttatgctgactacaatgacttgatggaactcaccgagacaatg
ttgagtgggatggtaaaggaacttacaggtggatataaaattaaatatcatgcaaatggg
ctggatgaggatccgattgagattgacttcactccacctttcagaaggattgacatgata
gaagaattagagaagatggcgaacctcaatattcccaaggacttttccagtgatgaggcc
aacaaatatttgaaagatgcatgcacaaagtatgagatcaaatgtgcccctcctgaaaca
acagcgcgtttgttggacaaacttgtaggacacttcttggaagagacttgtacagatcct
gctttcatcattaaccaccctgagttaatgagtcctttggcaaagtggcatagaacgaag
aaaggcctaaccgagcgttttgagttatttattaacaagcatgaactctgcaatgcatac
actgaattgaatgaccctgtggtacaacgccagcaatttgctgagcagctcaaggatcgg
caatctggtgatgatgaagcaatggctttggatgaaaccttctgtatggctcttgagtat
gggttgcctccaacaggtggttggggattgggaattgatcggctaacaatgttgttaact
gattcacaaaacattaaggaggttattctcttccctgccatgaaacctcaagatgagcca
tctgctaaagagggcgatgctggaaccagcaatgcaagggccgtgatacgaacttgcaaa
ttgcttctgaagatttgtatggtactttggttacttacagattgttacagatttctccgt
aaacatttttga
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