Quercus lobata (valley oak): 115995233
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Entry
115995233 CDS
T07350
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115995233
Enzymes [BR:
qlo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115995233
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
115995233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
Rtf2
Strumpellin
zf-C3HC4_2
DUF3512
DUF5321
Pellino_RING
4HB_MCP_1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
115995233
NCBI-ProteinID:
XP_030975577
UniProt:
A0A7N2M060
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Position
6:complement(37618202..37622682)
Genome browser
AA seq
386 aa
AA seq
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MELNTIKDAFDRVAKKQKLSCSKTQEVIDQIIQEIEKALEKILSAHDPESELDYKTVLSD
IRTTLKDIAPLSQQEGTQKELNIALSKYSKLLEKSFNSDISKAYRNVDFDVHTVNQIIAG
HFYRQGLFDLGDCFISEAEEPESAAAMKSPFLEMNKILEAIKSRDLGPALNWAANNSEKL
KQNGSDLVLRLHSMQFLEILQKGNTDEALKYARSHLTPFSSNHMAELQKLMGCLLWAGKL
DRAPYSALLSPTNWDKLAEELTRQFCNLLGHSYESPLSVTVAAGVQGLPSLLKFMNVMAG
KKLEWLSMKQLPVPVELDKEFQFHSIFVCPVSKEQSTEDNPPMLLSCGHVLCKQSIMKMS
KNHTKSFKCPYCPSDIEAGQCKQLHF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaataccattaaagatgcttttgatcgtgtggcgaagaaacaaaagctgtcc
tgttcaaaaactcaagaagtaattgaccagattatccaagaaattgaaaaggcattagag
aaaatactgtcagcccatgatcctgagtctgaacttgattataaaactgtcctttctgat
attcgaaccacactaaaagatattgctccactcagtcagcaggaaggcacacaaaaggag
ctgaacatagcactgagcaagtactccaagcttcttgagaaatccttcaattcagatata
tctaaggcttatcgaaatgttgactttgatgtgcacacagtgaaccagataattgccggc
catttctaccgtcagggcctgtttgacctgggtgactgcttcataagcgaggccgaggaa
ccggaatctgctgctgcaatgaaatccccatttttggaaatgaataagatacttgaagct
ataaagagtcgggacttagggccagcactgaattgggcagccaataactctgaaaaactt
aaacaaaatggatctgaccttgttctgcgacttcacagcatgcagtttttagaaatactc
cagaagggaaacacagatgaagctctcaagtatgccagaagtcacctaactcctttttct
tccaaccacatggctgaactccagaagctcatgggctgtcttctctgggctggaaaactt
gatcgtgccccatattctgcattactatcacccactaattgggataaactagctgaggag
ctaaccaggcagttctgcaatcttttggggcactcctatgagagcccattgagtgtgact
gtagcagcaggggtccaggggttgccatcgcttttgaagtttatgaatgtgatggcaggg
aagaagcttgaatggctgtctatgaagcagttgcctgtgccagtggagttggacaaggaa
tttcagttccattccatctttgtgtgtccggtgtccaaggagcaatcaacagaggataac
ccacccatgttgttgtcctgtggccacgtgctgtgcaagcagtctataatgaagatgtcc
aagaaccacacaaaatctttcaagtgcccttactgtcctagtgatattgaagcaggacaa
tgtaaacaactccatttctga
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