Quercus lobata (valley oak): 115995443
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Entry
115995443 CDS
T07350
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115995443
03036 Chromosome and associated proteins [BR:
qlo03036
]
115995443
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115995443
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115995443
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115995443
microRNA pathway
RISC loading complex
115995443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Lipoprotein_1
Piwi_N
Motif
Other DBs
NCBI-GeneID:
115995443
NCBI-ProteinID:
XP_030975878
LinkDB
All DBs
Position
1:complement(14274092..14281955)
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AA seq
956 aa
AA seq
DB search
MSRRGVGRQPDYRRDQPSPASQQGGGRGRVAGGGRGDADGKGAGGGKVGGRGRATAPSSF
SPVVSQPSLVASPSTSAPPQSQPQPSPSSVAELASGVERTVTLQDRAPPRRPGYGNVGKK
IQVRANHFLVEVADIDLFHYDVTITPAIKSKKVNRSVMTHLDTLYRESHFGGRRAAYDGS
NRMYTAGALPFTSKDFIVKLDNDDRPASSTSSSARKERLFKVAIKLVFKADLQHLKEFLV
SRQSDVPQKTIQILNLVLRAEPSMKDTVVGRSIYHPNTNDRLGDDGIVYWRGYYQSIRPT
QMGLSLNLIDMSARAFYEPLLVTDFLAKHFQFNLSSHLSYQDRLMIKKALRGIKVELPQT
DYVRSYKVTGVSTQSVSQLMFTLDDKKTKTSVLQYFRDKYNIVLQYASLPALQAGSDSNP
VYLQMEICKIAAGQRYTKRLNKKQVTTLLRATCQRPYERERNITDIRKRKLVNEDFGLQI
QEGLTTVDARVLPSPTLNYHETGREPREQPTMGQWNMINKKMVNGGRVSYWTCVNFSTRV
NKDFPFQFCDQLVNMCNSKGIDFNLDPLIPIHSAHPGQIDRALMDIHKQCEAKLKGIEPA
GKQLQLLIIILPDATGSYGKIKRICETELGIVSQCCQPKQASKLSMQYLENLALKINVKA
GGRNNVLTDAIQRRIPLISDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRG
LVSAQDHNEEIIQDLYKLVQDPQRDLVHGGMIRDQLIAFRKATGLRPQRIIFYRDGVGES
QFSQVLLYEMDATRKACLSLEENYLPPVTFIVVQKRHNTRLFPTDNQTDRSGNIQPGTVV
DTKICHPTQFDFYLNSHAGRQGTSRPMHYHVLYDENNFTADLLQVLTNNLCYTYARCTRS
VSIVPPAYYAHLTAFRARYYIEGDTSDGGFTGSENRTVFRPLPLIKDNVTDVMFYC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacgtggcgtcggtagacaaccggactatcgtcgtgaccagccgtcaccggcg
tctcaacaaggcggtggaagaggcagagttgctggtggcggacgaggcgacgctgatgga
aaaggagccggtggaggaaaagtaggaggaagaggacgcgctactgctccttctagtttc
tctccggttgtttcacaaccatcattagtcgcttcaccttcaacttcggctcctcctcag
tctcagcctcagccatcaccgtcctcggtggctgaactggcaagtggtgtcgaaaggaca
gtcacattgcaggatcgagctccgccgagaaggcctggctacggaaacgtcggaaagaaa
atccaagtccgagcaaatcattttctcgttgaagtcgccgatatagatctcttccactac
gatgtgactataacgccagcgataaaatcaaagaaagtgaatcggagtgtaatgactcat
ctagacacgctgtaccgagagtcacattttggtggcagaagggctgcttacgatggcagc
aatagaatgtatactgcaggtgcattgccgtttacatccaaagacttcattgtcaagtta
gacaatgatgaccgtcccgcatcttcgacttccagctctgcgagaaaagaacgcctattc
aaagtggcaattaagttggtttttaaggctgacttacagcatctgaaagagtttttagtc
agtaggcagtcagatgttccgcaaaaaacaattcaaattctcaatttggtactcagagcg
gaaccatcaatgaaggatactgttgtggggaggtcaatttatcatcctaacacaaatgat
agattgggtgacgacggtattgtttattggagaggctactaccaatctatcaggccaacc
cagatggggctctcgctcaacctcatcgatatgtcggccagagcattctatgaaccactt
cttgtgactgactttctcgcaaaacatttccaatttaatctatcaagtcatctgtcttat
caggaccgtcttatgattaaaaaggctttgagaggaataaaggttgagcttcctcagacg
gactatgtaagaagctacaaagtcactggtgtttcaacacaatcagttagccaattaatg
tttacccttgatgacaagaaaacaaagacatcagttcttcaatattttcgtgacaaatat
aacattgttctccagtatgcgtctttgcctgcccttcaagcgggtagtgattcaaatcca
gtttatttacagatggagatttgtaagattgctgccggacagagatacactaaaagatta
aataaaaaacaagtaactaccctattaagagcaacatgtcaacggccttatgaaagggaa
cggaatatcacagatatcagaaagcgaaagcttgtaaatgaggacttcggactccaaata
caagaaggacttacaacggttgatgctcgagtgttgccatctccaacgcttaattatcat
gaaactgggagagaaccaagggaacagcctacaatggggcaatggaatatgataaacaag
aaaatggtcaacggcggtagagtgtcatattggacgtgtgtgaatttctctactcgagtg
aacaaagattttccgttccaattttgtgatcaattggtcaacatgtgcaacagcaaagga
attgattttaacctagaccctttgataccaatacattcagctcatcctggtcaaattgat
agggctctcatggatattcacaagcagtgtgaagccaaacttaaaggaattgagccagca
ggaaaacagcttcagctgttgataattattttgcctgatgccactgggtcatatgggaag
attaaacgtatatgtgaaacggagctagggattgtttctcagtgctgtcagcccaagcaa
gcatcaaagcttagtatgcagtaccttgaaaatttggctctcaagatcaatgtgaaggcg
gggggacgtaacaatgtgttaactgatgctatacaaagaagaattcctcttatatctgat
cgaccaacaataatatttggtgcggatgtgacacatccacaaccaggagaggactctagc
ccttcgatagctgcggtagtagcttctatggattggccggaggtaaccaaatacagagga
cttgtctctgcacaggatcacaatgaagaaattatccaggatctctataaattagtgcag
gatcctcaaagggatttggttcatggaggcatgatcagagatcaacttattgccttcaga
aaagcaactgggcttagaccccagaggattattttctacagagatggtgttggcgaaagc
cagtttagtcaagttctgctttatgagatggatgcaacaagaaaggcctgtctctcacta
gaggaaaattatctgccgccagttacttttatcgttgttcagaaaagacataatacacgc
ctttttcctacagataatcagacagacaggagtggcaatattcaaccaggtactgttgtc
gatacgaagatttgccatccaactcagtttgacttctaccttaacagccatgctggaaga
caggggactagccggcccatgcactaccacgtgttgtacgatgagaacaattttactgca
gatctcttacaagtgctaaccaataatttgtgttacacgtatgcaaggtgcactcgatca
gtttccatagttcctcctgcatattatgcccatttaacagcttttcgagcacgctattac
attgagggtgatacatcagatggtggttttactgggagtgagaacagaacggtgttccgg
ccccttcctctgatcaaggataacgtgacggatgtcatgttttattgctga
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