Qipengyuania profunda: SD421_00535
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Entry
SD421_00535 CDS
T10896
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
qpr Qipengyuania profunda
Pathway
qpr03030
DNA replication
qpr03430
Mismatch repair
qpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SD421_00535
03430 Mismatch repair
SD421_00535
03440 Homologous recombination
SD421_00535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qpr03032
]
SD421_00535
03400 DNA repair and recombination proteins [BR:
qpr03400
]
SD421_00535
Enzymes [BR:
qpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SD421_00535
DNA replication proteins [BR:
qpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SD421_00535
DNA repair and recombination proteins [BR:
qpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SD421_00535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WPL55446
LinkDB
All DBs
Position
plsm_A:complement(98118..99002)
Genome browser
AA seq
294 aa
AA seq
DB search
MNDLDAMAEALQASGQYRVLRRLQPRLRINDSGGAPTRLGLFVDVETTGLDPTKHEIIEL
GMIPFSYLPDGLICDIGPPFEQFQEPSAPIPPEITRLTGITDAMVAGHRIDLDAVRALVD
RASLVIAHNAGFDRRFLERLSDAFVFKPWACSMSQIDWIGEGHEGVKLAYLAAGAGFFYD
RHRAVHDCRAAIELLAMPLPASRVPAMQKLLEKARRPSWRIWAENSPFDLKDVLKARGYR
WNGDDNPNPRAWYIDVDDGLQGDEIAFLRKEIYLRDVELLVREITPFNRFSDRT
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcttgacgcgatggccgaggcattacaggcaagtgggcagtaccgcgtacta
cgacgcttgcaacccaggcttcgaatcaatgattcaggcggtgccccgacccgtctcggt
ctattcgtggatgttgagacgacggggctcgatccgaccaagcacgagatcattgagctc
ggcatgataccgttcagctatctccccgacggtttgatttgcgatattggtccaccattc
gaacagtttcaggagccgtcggcgccgattccgcccgaaataacccgtttgaccgggatt
accgacgcgatggttgccgggcatcgtatcgatctcgacgctgtccgcgcactggtcgat
cgcgcttctcttgtgatcgcgcacaatgccggctttgatcggcggtttctcgaacgtctc
agcgatgcatttgtgttcaaaccctgggcctgttcgatgtcgcagatcgactggatcggc
gaaggtcatgaaggcgtgaaactggcctatctcgccgccggcgccgggtttttctacgat
cgtcaccgcgccgttcatgactgtcgcgcagccatcgaattgctcgctatgccgcttccc
gcaagccgcgtgccggcaatgcagaagcttctggaaaaggcccgacgcccaagctggcga
atctgggcggagaactcccctttcgatttgaaggacgtgctcaaggcacgcggctatcgc
tggaacggtgacgacaatcccaacccccgcgcttggtacatcgatgtcgacgatggtctg
cagggcgatgaaatcgcctttcttcgcaaagaaatctatctgcgcgacgtcgagttgctg
gtgcgtgagatcacccccttcaaccgcttttccgatcgcacctga
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