Qipengyuania profunda: SD421_01485
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Entry
SD421_01485 CDS
T10896
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
qpr Qipengyuania profunda
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qpr03036
]
SD421_01485
Chromosome and associated proteins [BR:
qpr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SD421_01485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Motif
Other DBs
NCBI-ProteinID:
WPL57131
LinkDB
All DBs
Position
complement(157661..161896)
Genome browser
AA seq
1411 aa
AA seq
DB search
MFQSDLFPARQKSQDVPLACAIGVKIADRLAAGCHLTRADISDLFAEETGVQDWGSAWTI
DDYNNVIEIGSLLWLRGSSRIDLTTGFHEAEARFDWLDAALPPRHVRSEGQIELQQFSTP
PMLAWLFAKAAALSSRDTLLEPSAGNGALAIWAYGQAASLTLNEIDAGRRGGLAHIFPKA
AISSHDGELIADLHCGPIPSVFLMNPPFARSEERGSDGGTALRHLRSAFRACVCGGRIVA
TMPDGFDASRFAKAQDEASLRLDVRLQRMFTRTGTGIAVRLVVIDKIPTGKSRPITGDTS
ELGEFHALLADLPPRALISAEVRRLPVRTMSRSVEHRAAIRPSAPFATTPVAGTDAVELS
YVALAQAAPVPEQAGIYLPYRPSRIAFADAPMHPTPLVESVAMGSVAAPVPEVSPLLPSN
WKVDKLISAAQCETLIYACKAFDRDLPEQFLPSQEGTMLELAEDGHSYRQGFFLGDGTGA
GKGRQIAAVMMDRWLAGERRHIWITKNEALLEDARRDWEALGGLPLDIQPLSRWKLGRPV
TLSEGILFVTYPTLRSGRAEDTRLDQILAWTGEEFVGVIAFDASHSMANALGSSSTRGKA
KGSEQGMAGLRLQNHLPRARVLYASATGASEIANLGYTARLGLWGPETAFPTHEGFMTEI
RAGGVAAMELVARDLKAKGLYLARALSFAGVEYEILEHCLTEAQISIYDAYAEAWAIIHR
NLDDALEATRVVDEDSGDTLNRNAKAAALSKFEGTKQRFFAQLLLSMKLPSLIPAIEEAL
GKDHSVVVQLVSTAEAMLDRRLADLSDEEREALDIDLSPREYVIDYLAKSFPVRLMQVFT
DEDGNLRSEAMSDDDGNPVLCSRAIAARDALIEQLCALPPIATALDAIIEHFGTGAVAEV
TGRSRRLVIGRDGQQRLERRSGSANVAEAQSFMEGTKRILIFSDAGGTGRSYHADLDCQN
QQRRVHFLLEPGWRADNAIQGLGRTNRTNQSSAPLFRPVTTDVKGERRFISTIARRLDSL
GALTRGQRQTGGQNLFDPADNLESDYARDALSRWFHLLYDGKLEATSFGDFVERTGLRLE
NPDGGLTDNLPTIQRWLNRILALPIALQNSIFDEYLGLVEARIEAAREAGTLDLGLETVR
VDSFEVLSDELLRADPVTGAETRLVSLGVKRHLRPLRLKRLVRMHEIGSLHAIPLRNARS
GKVALSVPARRLIADDGAVIERRRLLRPLKSANWTIEALGESLWEEIGVTEFTKAWCTEE
VKAAASPVTERLHLATGLLLPVWNRLAGDHVCVTRLVAEDGQSIIGREVLDVDLAKIAET
FGLAGVAGPLPDELGKLVLASGTPQPLASHDALMVKRSLVGGEQRLELTGYAPDRLDWYK
TMGCFTEIIRYRTRLFVPVSKASIILPALAV
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtcagacctttttcccgcccgccagaaatctcaggacgttccgttggcctgc
gccattggcgtcaaaattgccgaccgtctcgcagcaggatgccatctcactcgtgccgat
atttcggacctgttcgccgaggaaaccggagttcaggactggggcagcgcctggaccatc
gacgactataacaacgtgatcgagattggctccctgctctggctgcgtggatcttcgcgc
atcgatctgacgaccggcttccacgaagcggaagcgcgcttcgattggctcgacgcggct
ctaccacctcgtcacgtgcgcagcgaaggccagatcgagcttcagcaattctcgacccct
ccgatgctggcctggctgtttgcgaaagccgcggcgctttcatcacgggatacgctgctc
gaaccctccgccggcaatggtgctctcgcgatctgggcctacggccaagccgcatcgctt
actctaaacgagatcgatgctggcagacgcggcggcctggcacacatctttccgaaggcc
gcaatcagctcccacgatggcgaacttattgccgacttgcattgcggcccaatcccctcg
gtcttcctgatgaacccgccctttgcgcgtagcgaggaacgcggcagcgacggtggtaca
gcattgcgccatctccgaagcgcattcagagcttgcgtttgtggcggcaggattgtcgcg
accatgccagatggtttcgatgcttcgcgctttgccaaggcacaggacgaggcttcgctg
cggctcgatgtccggttgcagcggatgttcactcggacgggcacggggatcgctgtccgg
ctggtcgtgatcgacaaaatcccgacgggtaaaagccgaccgatcaccggcgatacgtcc
gagttgggcgagttccatgcgcttctcgccgatcttccgcctcgcgccttgatatcggct
gaagtgcgtcgcttgccggtgcgcacgatgtcgaggtccgtggagcaccgcgcagcgatc
cgaccttctgcacccttcgcgacgacgccagtcgctgggaccgatgcggtcgaactcagc
tatgttgcactggcgcaagctgcacctgtgcccgagcaggcaggcatctaccttccttat
cgcccaagccgcatagcgtttgccgatgctccgatgcatcctactccactggtggaatcg
gtcgcgatgggatcggtcgcggcacctgttccggaggtcagcccgctgctcccatcgaac
tggaaagtggataagctcatctccgcagcccagtgcgagacgctcatctacgcctgcaag
gcctttgatcgcgatctgcccgaacagtttctaccgagtcaggaagggacgatgcttgag
ctggccgaagatggccattcttaccgacagggcttcttccttggcgatgggaccggagcg
ggcaaggggcggcagattgcggcggtcatgatggatcgctggctcgcaggtgaacgtcgg
catatctggatcaccaagaacgaggcgctgctggaagatgcgcgccgcgactgggaagcg
cttggcgggctgccgctcgatatccagcccctctcgcgctggaagcttgggcgacccgta
acgctgtccgaaggcattctgtttgtcacctatccgacactgcgctcagggcgcgccgaa
gacacgcgcctcgaccagatccttgcctggacgggcgaagagttcgtaggcgtgatcgcg
ttcgacgcgtcccattcgatggccaatgcgctcgggtcttcgagcacgcgcggcaaggct
aagggatcggagcaggggatggcgggcctgaggctgcagaaccatctgccgcgcgcccgc
gtgctttacgcctccgccaccggcgcgtcggagatcgctaatcttggttacaccgcgagg
ctcggcctctggggacccgaaaccgctttcccgacgcatgaaggcttcatgaccgagatc
cgcgccggtggtgtagcagcgatggaactcgttgcgcgcgacctcaaggcaaaaggtctt
tacctcgcccgcgcgctgtcttttgccggggtcgaatacgagatcctagaacactgcctg
accgaagcgcagatcagtatctacgacgcctatgccgaagcctgggcgatcattcaccgc
aatctcgatgacgcgctcgaagccacacgagtcgtcgacgaggacagcggcgatacgctc
aatcgcaatgccaaggctgccgcgctgtcaaaatttgaaggcacaaagcagcgcttcttt
gcgcagctgcttctgtcgatgaaactgccgagtctcatcccggctatagaagaagcgctc
ggtaaagatcattcggtggtcgtgcagctggtttcgaccgctgaggccatgctcgaccgc
cgcctcgccgatctcagcgacgaggaacgcgaggcactcgatatcgaccttagtccgcgc
gaatacgtcatcgactatctcgccaagagcttcccggtgcgcctgatgcaggtctttacc
gacgaggacggcaatctgcgctccgaagcgatgagcgatgacgacggtaatccggttctt
tgctcgcgtgccattgccgcgcgcgatgcgctgatcgaacagctttgcgcgcttcctcca
atcgccacagcgctcgacgcgatcatcgagcattttgggaccggggcggtcgccgaagta
accgggcgcagccgcaggctcgttatcggcagggatgggcagcagcggctcgaacggcga
agcggcagtgccaatgtcgccgaagcgcagagcttcatggagggcacgaagcgcatcctc
atcttttctgatgctggcgggaccgggcgttcctatcatgccgatctcgactgccagaac
cagcagcgccgcgtccacttcctgctcgaaccgggctggcgggcggacaatgcaatccag
gggctcggtcgtaccaaccgcaccaaccagtcctcggccccgctgttccgaccggtgacc
accgatgtgaagggcgaacggcggtttatctcgaccatcgctcgcaggctcgacagcctt
ggtgccctgacgcgaggacagcgccagaccggcggtcagaacctcttcgatccggccgat
aatctcgaaagcgattatgctagggatgcactcagccgttggttccacttgttgtatgat
ggcaagctggaggcgacgagcttcggcgatttcgtcgagcgaaccggccttcggctcgag
aatcccgatggcgggctgaccgacaaccttccgactatccagcgctggctcaaccgcatc
cttgctctgccgattgcgctccaaaattctatcttcgatgaatatctggggttggtcgaa
gcgcgaatcgaggcagcgcgcgaagctggaactctcgatctgggccttgagacggttcgc
gtcgatagcttcgaagttctcagcgacgagcttttgcgagccgatcctgttaccggcgca
gaaacccgcctggtctcgcttggggtgaaacgccacctacgcccgctccgactgaagcgt
ctcgtgcggatgcacgagatcgggtcgcttcacgccatcccgttacgcaatgcgcgatcg
ggcaaggttgctctctcggtcccggcccggcggctcattgccgatgatggcgcggtgatc
gaacgccgtcggctgctccggccgctcaaatcggctaactggacgatcgaggcactcggt
gaaagcttgtgggaggagatcggcgtgaccgagttcaccaaggcctggtgcaccgaggaa
gttaaggcagccgcttcgccagtgaccgagcgccttcacctcgcaaccgggctgcttttg
ccggtctggaatcgcttggcgggagatcatgtttgcgtcacccggctcgttgccgaggac
ggccagtcgatcatcgggcgcgaagtgctcgatgtcgatctcgccaagattgccgaaacg
ttcggactggcaggggtggccggtcccttgcccgacgaactggggaagctggttttggcg
agcggcacgccgcagcctcttgccagtcatgacgcgctgatggtcaaacgctcgctggtc
ggaggcgagcaacggctcgaacttacgggatacgcgcctgatcggctcgactggtacaaa
accatgggctgtttcaccgagatcattcgttaccgcacgcgactgttcgtgccggtctcc
aaagcatcgatcattctacccgccctggccgtctga
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