Qipengyuania profunda: SD421_02515
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Entry
SD421_02515 CDS
T10896
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
qpr Qipengyuania profunda
Pathway
qpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD421_02515 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qpr03021
]
SD421_02515 (rho)
03019 Messenger RNA biogenesis [BR:
qpr03019
]
SD421_02515 (rho)
Transcription machinery [BR:
qpr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SD421_02515 (rho)
Messenger RNA biogenesis [BR:
qpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SD421_02515 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
ATPase_2
Spore_III_AA
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
GpA_ATPase
AAA_14
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
WPL57326
LinkDB
All DBs
Position
complement(350380..351645)
Genome browser
AA seq
421 aa
AA seq
DB search
MHLKDLKEKTPADLVAMAEELGVEGASTMRRQDLMFCILRELAEDEEYEEKIMGIGTIEV
LQDGFGFLRSPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEIRAPREGERYFALTTLY
KVNFDDPDAVRHRTNFDNLTPLYPDEKLSLDTLDPTVKDKSARVIDIISPQGKGQRALIV
APPRTGKTVLLQNIAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVKGEVISSTFDEPAN
RHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
LDVGKSGTRKEELLVEKDKLSKMWVLRRILMQMGTIDAMEFLLDKMKDSKTNEDFFATMN
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaggatttgaaagagaaaaccccggcagacctggtcgcgatggccgaagaa
ctgggggtcgagggtgcctcgaccatgcggcggcaggacctgatgttctgcattttgcgc
gagctcgccgaagacgaagaatacgaagaaaagatcatggggatcggcaccatcgaagtg
ctgcaggacggtttcggcttcctgcgcagccccgaggcaaactatcttgccggccccgat
gatatctacgtctcgcccaaccaggtccgcaaatggggcctgcgtaccggggacacggtc
gagggcgagatccgcgcaccgcgcgaaggcgagcgctattttgcgctgacgacgctctac
aaggtcaatttcgacgatcccgacgcggttcgccaccggaccaatttcgacaatctcacg
ccgctgtatcccgacgagaagctgtcgctcgacacgctcgacccgacggtcaaggacaag
tcggcacgggtgatcgacatcatcagcccgcagggcaagggccagcgcgcgctgatcgtc
gccccgccgcgcacgggtaagaccgtgctgctgcagaatatcgccaaggcgatcaccgac
aaccaccccgaggtcttcctgctggtcctgctcgtcgacgagcgccccgaggaagtcacc
gacatgcagcgcagcgtgaagggcgaggttatctcctcgaccttcgacgagcctgccaac
cgccatgtgcaggtcgccgaaatggtgatcgagaaggccaagcgcctggtcgagcacaag
cgggacgtcgtgatcctgctcgattcgatcacccgcctcgggcgcgcctacaacaccgtg
gtgcccagctcgggcaaggtgctgaccggcggtgtcgatgccaatgcgctgcagcgtccc
aagcgcttcttcggcgcggcccgtaacatcgaggagggcggctcgctgtcgatcatcgcc
accgcgctgatcgataccggcagccgcatggacgaagtgattttcgaagagttcaagggc
accggcaacagcgaaatcgtgctcgaccgcaaggtcgccgacaagcgtatcttccccgcg
ctcgacgtgggcaagagcggtacccgcaaggaagagctgctggtcgagaaggacaagctc
tcgaagatgtgggtcctgcgccgtatcctcatgcagatgggcacgattgacgcgatggaa
ttcctgctcgacaagatgaaggattccaagaccaacgaagacttcttcgcgacgatgaac
cagtaa
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