Qipengyuania profunda: SD421_07465
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Entry
SD421_07465 CDS
T10896
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
qpr Qipengyuania profunda
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qpr03016
]
SD421_07465 (truB)
Enzymes [BR:
qpr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SD421_07465 (truB)
Transfer RNA biogenesis [BR:
qpr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SD421_07465 (truB)
Prokaryotic type
SD421_07465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WPL58250
LinkDB
All DBs
Position
1372693..1373691
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AA seq
332 aa
AA seq
DB search
MSDLKPAPHGWLILDKPRGLGSTQAVGMVKRVLRQGGYAKTKVGHGGTLDPLAEGVLPIA
LGEATKLAGRMLDADKIYAFTIQFGEETATLDTEGEVTERSDRRPPMAAIAGVLDHFTGP
IEQVPPAYSALKIDGKRAYDRARAGETVEMKTRAVTVHDLYLAGGREDAEVRSAFATTAG
RPDPYDPQAPLELADSVTLVARVSKGTYIRSLARAIARALGTLGHVTYLRRIKAGPFLEE
QAISLDKLEEIAKGAAIENLLLPLEAGLDDIPVLTLDPDSAQAVRQGRVLSELPHTDGLH
LATAHNVPVALMELSGGTAKVVRGFNLPDVAE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctcaagcccgcaccgcatggctggctgatcctcgacaagccgcgcgggctg
ggttcgacacaggcggtcggcatggtcaagcgcgtgctgcgccagggcggctatgccaag
accaaggtcgggcatggcggtacactcgacccgctggccgagggcgtgctcccgatcgca
ctgggcgaagcgaccaagctggcggggcgcatgctcgacgccgataagatctacgccttc
accatccagttcggcgaggaaaccgccacgctcgacaccgagggcgaggtgaccgagcgt
agcgatcgccggccgccgatggcagcgattgcgggcgtgctcgaccatttcaccggcccc
attgaacaggtgccgcccgcctattcggcgctcaaaatcgatggcaagcgcgcctacgac
cgtgcccgcgcgggcgaaacggtcgaaatgaagacgcgcgctgtgacggttcacgacctt
tatctcgcgggtgggcgtgaggatgcggaggtgcggtccgctttcgctaccactgccggg
cggcccgacccttacgatccgcaggcgccgctcgaactggcggacagcgtcacgctggtc
gcgcgcgtctccaaggggacatacatccggtcgctggcacgggccatcgcacgcgcgctt
ggcacgctgggtcacgtcacctacctacggcgcatcaaggccgggccgttcctcgaagag
caggcgatttcgctggacaagctggaggaaatcgctaagggcgcggccattgaaaacctt
ctcttgccgcttgaggcaggactggacgacatcccggtcctcaccctcgatcccgacagc
gcgcaggcggtccgccagggccgggtattgtcggaactgccccataccgacgggctccac
ctcgccaccgcgcacaatgtgccggtagccttgatggaactcagcggcggtacggccaag
gtcgtgcggggtttcaacctgccggatgtcgcggagtag
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