Qipengyuania profunda: SD421_07475
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Entry
SD421_07475 CDS
T10896
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
qpr Qipengyuania profunda
Pathway
qpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
qpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD421_07475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qpr03019
]
SD421_07475 (pnp)
03016 Transfer RNA biogenesis [BR:
qpr03016
]
SD421_07475 (pnp)
Enzymes [BR:
qpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SD421_07475 (pnp)
Messenger RNA biogenesis [BR:
qpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SD421_07475 (pnp)
Transfer RNA biogenesis [BR:
qpr03016
]
Prokaryotic type
tRNA degradation factors
SD421_07475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
BioW
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WPL58252
LinkDB
All DBs
Position
1374140..1376416
Genome browser
AA seq
758 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSAAGRIPGGFFKREGRATEKETLTSRLIDRPVRPLFPEGFYNEINVICQVLSY
DGETEPDIVAMIAASAALTISGVPFMGPIGAARVGYRNGEYELNPSLGAALDEDGRLDLV
VAATQDAVMMVESEAKELTEEEMLGAVLFAHEESRKVIGAIVDLAEQAAKDPWEIDASDD
TSAIKEQLRGIVGDDIAAAYKLTDKSARSNALNEARAKAKEAFASEEAQTQMVANKAVKK
LEAEIVRGAILKDGQRIDGRKLDQVRPIEAMVGLLPRTHGSALFTRGETQAICTTTLGTK
DAEQMIDGLEGLSYNHFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAWRALHPVLPAHE
DFPYTIRLLSDITESNGSSSMATVCGGCLSMMDAGVPIERPVSGIAMGLILEGDDFAVLS
DILGDEDHLGDMDFKVAGSESGITSLQMDIKVAGITQEIMKTALEQAKAGRAHILGEMNK
ALTGARTEVSKHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISS
SNADEIEAARKWIEGIVEEAEVGKVYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERV
EKPTDVVSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPAREPRGDRGPRSGG
GGRGGDRRGGRGGPRRDRDGGGDKDGGGEAHVPDFLKD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaagaccctcaccctcgaaacc
ggccgcatcgcccgtcaggctgacggcgccgttctggccacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgccgccaagagtgtacgcgaagggcaggacttcttcccgctgacc
gtccactaccaggaaaaattctccgctgcgggccggatccccggcggcttcttcaagcgc
gaaggtcgcgcgacagagaaggaaacgctcacctcgcgcctcatcgaccgccccgtgcgg
ccgctgttccccgaaggtttctacaacgaaatcaacgtgatctgccaggtcctgtcgtat
gacggcgagaccgagcccgatatcgtcgcaatgatcgccgcttcggctgcgctgaccatt
agcggcgtgcccttcatgggcccgatcggtgctgcacgcgtcggttaccgcaatggcgaa
tacgaactcaacccgagcctcggtgcagcgcttgacgaagacggtcgcctcgacctcgtc
gttgccgccacgcaggacgcggtgatgatggtcgaatccgaagccaaggagctgaccgaa
gaggaaatgctcggcgcggtgctgttcgcgcatgaggaaagccgcaaggtcatcggcgcg
atcgtcgacctggccgaacaggctgccaaggatccgtgggaaatcgacgcttcggacgat
acctcggcgatcaaggaacagctgcgtggcatcgttggcgatgacatcgccgctgcttac
aagctgaccgacaagtcggcgcgttcgaatgcgctcaacgaagcgcgtgcgaaggccaag
gaagcattcgccagcgaagaagcgcagacgcagatggtcgccaacaaggcggtcaagaag
ctcgaagccgaaatcgtccgcggggccatcctcaaggacggtcagcgcatcgacggccgc
aagctcgaccaggtccggccgatcgaggcgatggtcggcctgttgccccgcacgcatggt
tcggcgctgttcacgcgcggtgaaacgcaggcgatctgcaccaccacgctgggcaccaag
gatgccgagcagatgatcgacggtctcgaaggcctgtcgtacaatcacttcatgctgcac
tataacttcccgccctattcggtcggcgaagtgggtcgcttcggcttcaccagccgccgc
gaaaccggccacggcaagctcgcatggcgcgcgctgcacccggtgctgcccgcgcatgaa
gacttcccctataccatccgcctcctgtcggacatcaccgagtccaacggctcgtcctcg
atggcgaccgtttgcggtggctgtctgtcgatgatggatgcgggcgttccgatcgaacgc
ccggtatcgggcatcgcgatgggcctgatcctcgaaggcgacgacttcgcggtcctgtcg
gacatcctcggtgacgaagatcacctgggcgacatggacttcaaggtcgctggttcggaa
agcgggatcacctcgctgcagatggacatcaaggtcgccggcatcacgcaggaaatcatg
aagaccgcgctcgagcaggccaaggccggccgcgcgcacatcctcggtgaaatgaacaag
gcgctgaccggcgcccgcaccgaggtttccaagcacgccccgcgtatcgagaccatgcag
atcgacaagtcgaagatccgcgacgtcatcggtaccggcggcaaggtgatccgcgagatc
gttgccgaaaccggcgccaaggtcgacatcgacgacgagggcgtgatcaagatcagctcc
tccaacgccgacgagatcgaagccgcacgcaagtggatcgaaggcatcgtcgaagaggcg
gaagtcggcaaggtctacaacggcaaggtcgtcaacatcgtcgacttcggcgctttcgtg
aacttcatgggtggcaaggacggtctcgtccacgtcagcgaaatgaagaacgagcgcgtc
gagaagccgaccgacgtcgtgtcggaaggccaggaagtgaaggtcaaggtcctcgagatc
gaccagcgcggcaaggttcgtctgtcgatgcgcgtcgttgaccaggaaaccggcgaagag
ctggaagacacccgtcccgcacgcgaaccgcgcggtgaccgtggcccgcgtagtggcggt
ggtggccgtggcggcgatcgccgcggtggccggggcggcccgcgccgcgaccgcgatggc
ggcggcgacaaggacgggggcggtgaagcccacgtgcccgacttcctgaaggactga
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